Strain Fitness in Dickeya dianthicola 67-19 around HGI48_RS11085

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
2,401,997	+				+0.3
2,401,997	+		HGI48_RS11075	0.76	+0.5
2,401,997	+		HGI48_RS11075	0.76	-1.4
2,401,998	-		HGI48_RS11075	0.77	-2.7
2,401,998	-		HGI48_RS11075	0.77	-2.5
2,401,998	-		HGI48_RS11075	0.77	-0.4
2,401,998	-		HGI48_RS11075	0.77	-0.7
2,402,001	+		HGI48_RS11075	0.77	-0.6
2,402,045	+		HGI48_RS11075	0.85	-0.3
2,402,358	+		HGI48_RS11080	0.29	-1.9
2,402,466	-		HGI48_RS11080	0.42	-1.3
2,402,549	+		HGI48_RS11080	0.53	+0.1
2,402,550	-		HGI48_RS11080	0.53	-0.1
2,402,550	-		HGI48_RS11080	0.53	-0.8
2,402,550	-		HGI48_RS11080	0.53	-0.1
2,402,550	-		HGI48_RS11080	0.53	-1.1
2,402,550	-				-1.3
2,402,656	+		HGI48_RS11080	0.66	+0.5
2,402,656	+		HGI48_RS11080	0.66	-0.4
2,402,656	+		HGI48_RS11080	0.66	-0.2
2,402,656	+		HGI48_RS11080	0.66	-1.7
2,402,656	+		HGI48_RS11080	0.66	+0.4
2,402,657	-		HGI48_RS11080	0.66	-0.7
2,402,660	-				+2.3
2,402,685	+		HGI48_RS11080	0.69	-0.2
2,402,686	-		HGI48_RS11080	0.70	-0.3
2,402,686	-		HGI48_RS11080	0.70	-1.4
2,402,689	+		HGI48_RS11080	0.70	+1.5
2,402,689	+		HGI48_RS11080	0.70	+0.1
2,402,690	-		HGI48_RS11080	0.70	-0.2
2,402,690	-		HGI48_RS11080	0.70	-0.7
2,402,690	-		HGI48_RS11080	0.70	-0.2
2,402,690	-		HGI48_RS11080	0.70	-0.4
2,402,690	-		HGI48_RS11080	0.70	+0.6
2,402,690	-		HGI48_RS11080	0.70	-1.2
2,402,690	-		HGI48_RS11080	0.70	+0.1
2,402,690	-		HGI48_RS11080	0.70	+0.6
2,402,690	-		HGI48_RS11080	0.70	+0.9
2,402,840	+		HGI48_RS11080	0.89	+0.8
2,402,852	+				+0.5
2,402,862	+				-0.6
2,402,930	+				-0.6
2,402,930	+				+0.7
2,403,063	+		HGI48_RS11085	0.12	-0.0
2,403,063	+		HGI48_RS11085	0.12	-1.1
2,403,064	-				+1.5
2,403,075	+		HGI48_RS11085	0.14	+0.6
2,403,097	-		HGI48_RS11085	0.18	-0.3
2,403,149	+		HGI48_RS11085	0.27	-1.3
2,403,150	-				+0.9
2,403,150	-				+0.3
2,403,298	-		HGI48_RS11085	0.53	+0.1
2,403,314	+		HGI48_RS11085	0.55	-1.0
2,403,314	+				+1.0
2,403,315	-		HGI48_RS11085	0.56	+0.5
2,403,315	-		HGI48_RS11085	0.56	+0.6
2,403,315	-		HGI48_RS11085	0.56	-0.1
2,403,345	+		HGI48_RS11085	0.61	-0.3
2,403,346	-		HGI48_RS11085	0.61	-0.8
2,403,481	-		HGI48_RS11085	0.84	+0.0
2,403,492	+		HGI48_RS11085	0.86	-0.7
2,403,492	+				-0.7
2,403,493	-		HGI48_RS11085	0.86	-1.2
2,403,493	-		HGI48_RS11085	0.86	-0.9
2,403,497	+		HGI48_RS11085	0.87	-0.3
2,403,497	+		HGI48_RS11085	0.87	+0.3
2,403,498	-		HGI48_RS11085	0.87	+0.3
2,403,517	+				-0.2
2,403,619	-				-1.0
2,403,623	+				+0.6
2,403,623	+				-0.4
2,403,694	-				+0.1
2,403,694	-				-0.8
2,403,739	+				+0.3
2,403,740	-				+2.0
2,403,743	-				+0.3
2,403,864	-				+1.5
2,403,921	-				+0.4
2,404,064	-		HGI48_RS11090	0.42	-1.3
2,404,152	+		HGI48_RS11090	0.62	+1.3
2,404,179	-		HGI48_RS11090	0.68	+2.2
2,404,184	-		HGI48_RS11090	0.69	-0.0
2,404,184	-		HGI48_RS11090	0.69	-0.1
2,404,241	-		HGI48_RS11090	0.82	+0.8
2,404,264	-		HGI48_RS11090	0.88	+0.6
2,404,293	+				-0.1
2,404,294	-				+1.3
2,404,350	+				+0.1
2,404,357	+				+0.6
2,404,357	+				-0.5
2,404,358	-				+0.3
2,404,383	+				+0.3
2,404,383	+				-0.1
2,404,384	-				+1.2
2,404,480	+				+0.5
2,404,518	-				+1.4