Strain Fitness in Dickeya dianthicola 67-19 around HGI48_RS11070

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
2,400,043	-		HGI48_RS11065	0.46	+0.1
2,400,128	+		HGI48_RS11065	0.52	+1.4
2,400,129	-				+1.6
2,400,129	-		HGI48_RS11065	0.52	+0.4
2,400,129	-		HGI48_RS11065	0.52	+1.0
2,400,198	+		HGI48_RS11065	0.57	-0.2
2,400,198	+		HGI48_RS11065	0.57	-0.9
2,400,198	+				-0.3
2,400,199	-		HGI48_RS11065	0.57	-0.7
2,400,199	-		HGI48_RS11065	0.57	+0.3
2,400,199	-				+0.7
2,400,199	-		HGI48_RS11065	0.57	-0.4
2,400,268	+		HGI48_RS11065	0.62	-0.2
2,400,364	+		HGI48_RS11065	0.69	+0.5
2,400,364	+		HGI48_RS11065	0.69	+0.4
2,400,414	+		HGI48_RS11065	0.73	-0.7
2,400,414	+		HGI48_RS11065	0.73	-0.3
2,400,414	+		HGI48_RS11065	0.73	-1.5
2,400,415	-				-0.7
2,400,415	-				+0.7
2,400,415	-		HGI48_RS11065	0.73	-1.0
2,400,415	-		HGI48_RS11065	0.73	+0.5
2,400,415	-		HGI48_RS11065	0.73	+0.3
2,400,415	-		HGI48_RS11065	0.73	+1.7
2,400,498	+		HGI48_RS11065	0.79	+1.5
2,400,499	-		HGI48_RS11065	0.79	-0.7
2,400,500	+		HGI48_RS11065	0.79	-2.0
2,400,500	+				+1.0
2,400,501	-		HGI48_RS11065	0.79	+0.2
2,400,501	-		HGI48_RS11065	0.79	-3.2
2,400,501	-				+0.3
2,400,530	-				-1.3
2,400,605	-				+1.7
2,400,681	+				-0.5
2,400,722	+				+1.5
2,400,748	+				-0.6
2,400,749	-				+0.7
2,400,810	+				-1.3
2,400,811	-				+0.3
2,400,860	-				-0.0
2,400,883	+				+0.4
2,400,902	-				-0.3
2,400,970	-				+0.6
2,401,033	+				+0.3
2,401,033	+				-0.0
2,401,033	+				-0.7
2,401,154	-				+1.7
2,401,184	+		HGI48_RS11070	0.27	-0.5
2,401,185	-		HGI48_RS11070	0.27	-0.3
2,401,187	-		HGI48_RS11070	0.27	+0.6
2,401,253	+		HGI48_RS11070	0.39	+0.8
2,401,253	+		HGI48_RS11070	0.39	+0.2
2,401,253	+		HGI48_RS11070	0.39	-3.2
2,401,253	+		HGI48_RS11070	0.39	-0.1
2,401,253	+		HGI48_RS11070	0.39	-0.9
2,401,253	+		HGI48_RS11070	0.39	-0.0
2,401,253	+				+1.3
2,401,254	-		HGI48_RS11070	0.39	+0.5
2,401,254	-		HGI48_RS11070	0.39	-0.9
2,401,254	-		HGI48_RS11070	0.39	-0.6
2,401,254	-		HGI48_RS11070	0.39	-0.9
2,401,254	-		HGI48_RS11070	0.39	-0.4
2,401,254	-		HGI48_RS11070	0.39	+0.8
2,401,254	-		HGI48_RS11070	0.39	+0.4
2,401,254	-		HGI48_RS11070	0.39	+0.6
2,401,254	-		HGI48_RS11070	0.39	-1.9
2,401,254	-		HGI48_RS11070	0.39	-0.2
2,401,254	-		HGI48_RS11070	0.39	-0.1
2,401,259	+		HGI48_RS11070	0.40	-0.0
2,401,259	+		HGI48_RS11070	0.40	+0.1
2,401,347	-		HGI48_RS11070	0.56	+0.7
2,401,398	-		HGI48_RS11070	0.65	-1.7
2,401,400	+		HGI48_RS11070	0.66	-0.1
2,401,401	-		HGI48_RS11070	0.66	+0.7
2,401,401	-		HGI48_RS11070	0.66	-0.7
2,401,401	-		HGI48_RS11070	0.66	-1.7
2,401,430	+		HGI48_RS11070	0.71	-0.0
2,401,430	+		HGI48_RS11070	0.71	-0.0
2,401,431	-		HGI48_RS11070	0.71	-0.1
2,401,448	+				-0.3
2,401,554	+				-0.3
2,401,711	+		HGI48_RS11075	0.25	+0.5
2,401,711	+				-0.3
2,401,711	+		HGI48_RS11075	0.25	+0.1
2,401,712	-		HGI48_RS11075	0.25	+0.5
2,401,712	-		HGI48_RS11075	0.25	+0.4
2,401,786	+				+1.3
2,401,787	-		HGI48_RS11075	0.38	-1.0
2,401,805	+		HGI48_RS11075	0.42	-0.1
2,401,806	-		HGI48_RS11075	0.42	-0.3
2,401,806	-		HGI48_RS11075	0.42	-0.2
2,401,806	-		HGI48_RS11075	0.42	+1.2
2,401,806	-		HGI48_RS11075	0.42	-0.7
2,401,841	+		HGI48_RS11075	0.48	+0.3
2,401,979	-		HGI48_RS11075	0.73	+0.1
2,401,983	+		HGI48_RS11075	0.74	+0.9
2,401,984	-		HGI48_RS11075	0.74	-1.3
2,401,984	-		HGI48_RS11075	0.74	+0.5
2,401,997	+				+0.3
2,401,997	+		HGI48_RS11075	0.76	+0.5
2,401,997	+		HGI48_RS11075	0.76	-1.4
2,401,998	-		HGI48_RS11075	0.77	-2.7
2,401,998	-		HGI48_RS11075	0.77	-2.5
2,401,998	-		HGI48_RS11075	0.77	-0.4
2,401,998	-		HGI48_RS11075	0.77	-0.7
2,402,001	+		HGI48_RS11075	0.77	-0.6
2,402,045	+		HGI48_RS11075	0.85	-0.3
2,402,358	+		HGI48_RS11080	0.29	-1.9
2,402,466	-		HGI48_RS11080	0.42	-1.3
2,402,549	+		HGI48_RS11080	0.53	+0.1
2,402,550	-		HGI48_RS11080	0.53	-0.1
2,402,550	-		HGI48_RS11080	0.53	-0.8
2,402,550	-		HGI48_RS11080	0.53	-0.1
2,402,550	-		HGI48_RS11080	0.53	-1.1
2,402,550	-				-1.3