Strain Fitness in Dickeya dianthicola 67-19 around HGI48_RS10995

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
2,383,154	+		HGI48_RS10985	0.70	-1.2
2,383,154	+		HGI48_RS10985	0.70	+0.2
2,383,285	+				+0.7
2,383,285	+				-0.7
2,383,286	-				-0.1
2,383,286	-				-0.4
2,383,286	-				-1.6
2,383,286	-				-2.5
2,383,286	-				-0.9
2,383,286	-				-0.7
2,383,296	+				+1.0
2,383,422	+				-0.9
2,383,424	+				-3.4
2,383,425	-				+2.0
2,383,425	-				-1.3
2,383,425	-				-0.9
2,383,425	-				-0.3
2,383,687	+		HGI48_RS10990	0.41	+0.5
2,383,689	+		HGI48_RS10990	0.41	+1.1
2,383,966	-		HGI48_RS10990	0.76	-0.5
2,383,979	-		HGI48_RS10990	0.78	-2.0
2,384,009	+				+0.3
2,384,010	-		HGI48_RS10990	0.82	-1.6
2,384,030	+		HGI48_RS10990	0.84	-2.3
2,384,030	+		HGI48_RS10990	0.84	-0.6
2,384,030	+				-0.3
2,384,031	-		HGI48_RS10990	0.84	+0.5
2,384,031	-				+1.6
2,384,031	-		HGI48_RS10990	0.84	-1.7
2,384,438	+		HGI48_RS10995	0.28	+0.8
2,384,438	+				-0.3
2,384,439	-		HGI48_RS10995	0.28	-0.6
2,384,613	+		HGI48_RS10995	0.45	-0.8
2,384,613	+		HGI48_RS10995	0.45	-0.6
2,384,613	+		HGI48_RS10995	0.45	-1.7
2,384,613	+		HGI48_RS10995	0.45	-0.1
2,385,142	+				+1.0
2,385,172	+				-0.1
2,385,172	+				-0.1
2,385,320	-				-0.5
2,385,324	+				+0.8
2,385,324	+				+1.5
2,385,373	+				-0.5
2,385,374	-				+0.7
2,385,374	-				+0.3
2,385,392	+				-1.0
2,385,393	-				+0.3
2,385,412	+				-0.1
2,385,412	+				-0.4
2,385,415	-				-2.9
2,385,415	-				+0.4
2,385,450	+				+0.3
2,385,451	-				-1.4
2,385,465	-				-0.7
2,385,465	-				-0.3
2,385,477	-				-0.6
2,385,581	-				+0.0
2,385,604	+				+1.7
2,385,689	+		HGI48_RS11000	0.17	-0.1
2,385,689	+		HGI48_RS11000	0.17	-0.0
2,385,776	+		HGI48_RS11000	0.25	-1.0
2,385,846	-		HGI48_RS11000	0.30	+1.1
2,385,846	-		HGI48_RS11000	0.30	-0.3
2,385,846	-		HGI48_RS11000	0.30	-0.4
2,385,878	+				+1.9
2,385,896	+				+0.3
2,385,896	+		HGI48_RS11000	0.35	+0.5
2,385,897	-		HGI48_RS11000	0.35	+0.3
2,385,897	-				+0.7
2,385,919	-		HGI48_RS11000	0.36	-2.3
2,385,931	+		HGI48_RS11000	0.37	+0.3
2,386,089	+		HGI48_RS11000	0.51	-0.1
2,386,090	-		HGI48_RS11000	0.51	-0.3
2,386,165	-		HGI48_RS11000	0.57	-0.7
2,386,165	-		HGI48_RS11000	0.57	+0.5