Strain Fitness in Dickeya dianthicola 67-19 around HGI48_RS10885

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
2,359,563	-		HGI48_RS10880	0.12	-1.7
2,359,721	-		HGI48_RS10880	0.39	-2.5
2,359,762	+		HGI48_RS10880	0.46	-1.7
2,359,813	+		HGI48_RS10880	0.55	-0.2
2,359,813	+		HGI48_RS10880	0.55	-0.3
2,359,813	+		HGI48_RS10880	0.55	+0.7
2,359,814	-		HGI48_RS10880	0.55	+1.3
2,359,814	-		HGI48_RS10880	0.55	+0.3
2,359,815	+		HGI48_RS10880	0.56	-0.3
2,359,815	+		HGI48_RS10880	0.56	+0.6
2,359,815	+		HGI48_RS10880	0.56	+0.3
2,359,816	-		HGI48_RS10880	0.56	-2.0
2,359,816	-		HGI48_RS10880	0.56	-0.7
2,359,816	-		HGI48_RS10880	0.56	+0.4
2,359,834	+		HGI48_RS10880	0.59	+0.5
2,359,835	-		HGI48_RS10880	0.59	+0.6
2,359,857	+		HGI48_RS10880	0.63	-1.3
2,359,857	+		HGI48_RS10880	0.63	+1.1
2,359,857	+		HGI48_RS10880	0.63	-0.5
2,359,858	-		HGI48_RS10880	0.63	-0.7
2,359,858	-				+1.5
2,359,858	-		HGI48_RS10880	0.63	+0.5
2,359,858	-		HGI48_RS10880	0.63	+0.0
2,359,858	-		HGI48_RS10880	0.63	-0.8
2,359,858	-		HGI48_RS10880	0.63	-0.7
2,359,957	+				+1.0
2,359,958	-		HGI48_RS10880	0.80	-0.3
2,359,958	-		HGI48_RS10880	0.80	-0.2
2,359,958	-		HGI48_RS10880	0.80	+0.3
2,359,981	+		HGI48_RS10880	0.84	+1.1
2,359,982	-		HGI48_RS10880	0.84	+0.8
2,360,016	+				-0.0
2,360,017	-				+0.6
2,360,074	+				-1.5
2,360,074	+				-1.5
2,360,074	+				-1.0
2,360,089	-				-0.2
2,360,089	-				+1.4
2,360,089	-				+0.3
2,360,089	-				+0.5
2,360,092	+				-2.7
2,360,109	+				-1.3
2,360,132	+				+0.1
2,360,132	+				+0.8
2,360,132	+				+0.5
2,360,132	+				-0.2
2,360,133	-				-1.4
2,360,134	+				-1.0
2,360,152	+				-0.3
2,360,219	+				-0.4
2,360,263	+				+0.3
2,360,263	+				-1.0
2,360,263	+				+0.4
2,360,264	-				+1.2
2,360,310	+				+0.4
2,360,313	-				+0.9
2,360,313	-				-0.0
2,360,381	+				+0.7
2,360,382	-				-0.1
2,360,441	-				+0.3
2,360,640	+		HGI48_RS10885	0.20	-0.2
2,360,640	+		HGI48_RS10885	0.20	-0.7
2,360,641	-		HGI48_RS10885	0.21	-0.5
2,360,641	-		HGI48_RS10885	0.21	+0.6
2,360,674	+		HGI48_RS10885	0.27	-1.7
2,360,845	+		HGI48_RS10885	0.59	+1.1
2,360,845	+		HGI48_RS10885	0.59	-0.5
2,360,911	+		HGI48_RS10885	0.72	-1.7
2,360,912	-		HGI48_RS10885	0.72	-2.9
2,360,933	+		HGI48_RS10885	0.76	-0.7
2,360,988	+		HGI48_RS10885	0.87	-2.3
2,360,992	+		HGI48_RS10885	0.87	-1.0
2,361,166	+				+0.1
2,361,166	+				-1.3
2,361,171	+				-0.4
2,361,193	+				-1.5
2,361,227	+				-0.3
2,361,227	+				-0.9
2,361,228	-				-0.0
2,361,240	-				-0.5
2,361,281	+				-0.4
2,361,281	+				+0.7
2,361,282	-				+0.5
2,361,282	-				+0.7
2,361,282	-				-0.5
2,361,340	+				+1.0
2,361,372	+				-1.0
2,361,373	-				-0.3
2,361,456	-				+0.4
2,361,517	-				+0.6
2,361,627	+		HGI48_RS10890	0.12	+1.3
2,361,643	+		HGI48_RS10890	0.13	-0.5
2,361,653	+		HGI48_RS10890	0.14	-0.4
2,361,653	+		HGI48_RS10890	0.14	-2.3
2,361,654	-		HGI48_RS10890	0.14	+0.3
2,361,654	-		HGI48_RS10890	0.14	-1.5
2,361,852	-		HGI48_RS10890	0.24	-0.1
2,361,971	+		HGI48_RS10890	0.30	+0.4
2,361,971	+		HGI48_RS10890	0.30	+0.4
2,361,971	+		HGI48_RS10890	0.30	+0.3
2,361,971	+		HGI48_RS10890	0.30	-0.1
2,361,972	-		HGI48_RS10890	0.30	-0.3
2,361,972	-		HGI48_RS10890	0.30	-0.5
2,361,972	-		HGI48_RS10890	0.30	-2.3
2,361,972	-		HGI48_RS10890	0.30	+0.5
2,361,972	-		HGI48_RS10890	0.30	-0.2
2,361,972	-		HGI48_RS10890	0.30	-0.5
2,361,972	-		HGI48_RS10890	0.30	+0.3
2,361,972	-		HGI48_RS10890	0.30	-0.9
2,361,972	-		HGI48_RS10890	0.30	+0.0
2,361,972	-		HGI48_RS10890	0.30	+0.3
2,361,972	-		HGI48_RS10890	0.30	-0.3
2,361,972	-		HGI48_RS10890	0.30	-2.0
2,361,973	+				+0.3
2,361,973	+		HGI48_RS10890	0.30	-0.7
2,361,974	-		HGI48_RS10890	0.30	-1.5
2,361,974	-				+2.1
2,361,996	+		HGI48_RS10890	0.31	-1.1
2,361,997	-		HGI48_RS10890	0.31	+1.5
2,362,039	+				+0.3