Strain Fitness in Dickeya dianthicola 67-19 around HGI48_RS10680

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
2,306,715	+		HGI48_RS10675	0.35	-0.2
2,306,860	+		HGI48_RS10675	0.47	-0.4
2,306,860	+		HGI48_RS10675	0.47	+0.6
2,306,860	+		HGI48_RS10675	0.47	+0.3
2,306,904	-				+1.6
2,306,955	+		HGI48_RS10675	0.54	-0.2
2,307,061	+		HGI48_RS10675	0.63	+0.3
2,307,228	+				+1.7
2,307,228	+				-1.3
2,307,229	-		HGI48_RS10675	0.77	-0.1
2,307,229	-		HGI48_RS10675	0.77	+1.3
2,307,229	-		HGI48_RS10675	0.77	+1.3
2,307,229	-		HGI48_RS10675	0.77	-1.5
2,307,229	-		HGI48_RS10675	0.77	-0.6
2,307,231	+		HGI48_RS10675	0.77	-0.1
2,307,231	+		HGI48_RS10675	0.77	-0.9
2,307,231	+		HGI48_RS10675	0.77	-0.4
2,307,231	+		HGI48_RS10675	0.77	+0.4
2,307,231	+		HGI48_RS10675	0.77	+0.3
2,307,231	+		HGI48_RS10675	0.77	-0.7
2,307,232	-		HGI48_RS10675	0.77	+0.3
2,307,249	+		HGI48_RS10675	0.78	-1.7
2,307,388	+		HGI48_RS10675	0.90	-0.3
2,307,389	-				-0.5
2,307,424	+				-2.0
2,307,425	-				-0.3
2,307,472	+				-0.6
2,307,473	-				-0.5
2,307,492	+				-0.3
2,307,493	-				-0.6
2,307,500	+				-1.7
2,307,524	-				-2.0
2,307,524	-				-0.4
2,307,524	-				+1.0
2,307,535	+				+0.1
2,307,535	+				+0.1
2,307,549	+				+1.9
2,307,549	+				+0.5
2,307,549	+				-1.3
2,307,549	+				+0.9
2,307,549	+				-1.0
2,307,549	+				-0.2
2,307,550	-				+0.0
2,307,553	+				-2.5
2,307,553	+				+0.6
2,307,553	+				+0.7
2,307,554	-				-0.2
2,307,639	+				-1.3
2,307,660	-				-0.1
2,307,660	-				-0.0
2,307,716	+				+0.5
2,307,723	+				-0.7
2,307,724	-				-0.7
2,307,783	-		HGI48_RS10680	0.11	+0.0
2,307,812	+		HGI48_RS10680	0.15	-0.9
2,307,822	+		HGI48_RS10680	0.16	-0.9
2,307,822	+		HGI48_RS10680	0.16	-1.7
2,307,823	-		HGI48_RS10680	0.17	-0.7
2,307,823	-		HGI48_RS10680	0.17	-0.1
2,307,823	-		HGI48_RS10680	0.17	+0.1
2,307,823	-				+1.3
2,307,823	-		HGI48_RS10680	0.17	-0.5
2,307,823	-		HGI48_RS10680	0.17	-0.2
2,307,823	-		HGI48_RS10680	0.17	+0.9
2,307,982	+				+0.7
2,307,982	+		HGI48_RS10680	0.40	+0.6
2,307,982	+		HGI48_RS10680	0.40	-0.5
2,307,983	-		HGI48_RS10680	0.40	-0.3
2,308,062	+		HGI48_RS10680	0.52	-0.5
2,308,062	+		HGI48_RS10680	0.52	-0.7
2,308,152	+		HGI48_RS10680	0.65	-0.6
2,308,152	+		HGI48_RS10680	0.65	-1.0
2,308,152	+		HGI48_RS10680	0.65	-0.2
2,308,152	+		HGI48_RS10680	0.65	-1.1
2,308,153	-		HGI48_RS10680	0.66	-0.2
2,308,153	-		HGI48_RS10680	0.66	-0.7
2,308,249	+		HGI48_RS10680	0.80	-0.5
2,308,249	+		HGI48_RS10680	0.80	+0.3
2,308,249	+		HGI48_RS10680	0.80	+0.5
2,308,250	-		HGI48_RS10680	0.80	-0.5
2,308,250	-		HGI48_RS10680	0.80	-0.3
2,308,348	+				+1.0
2,308,348	+				-2.3
2,308,349	-				-0.5
2,308,349	-				-0.7
2,308,349	-				-1.3
2,308,349	-				-1.2
2,308,368	+				+1.3
2,308,382	-				+0.3
2,308,522	+				-0.4
2,308,523	-				+0.3
2,308,544	+				-1.3
2,308,544	+				-1.5
2,308,544	+				-0.7
2,308,544	+				-0.2
2,308,738	+		HGI48_RS10685	0.22	+0.0
2,308,738	+		HGI48_RS10685	0.22	-1.2
2,308,834	+		HGI48_RS10685	0.49	+0.9
2,308,835	-		HGI48_RS10685	0.50	-0.3
2,308,838	-		HGI48_RS10685	0.50	-0.3
2,308,838	-		HGI48_RS10685	0.50	+0.3
2,308,919	-		HGI48_RS10685	0.73	-0.6
2,308,924	+		HGI48_RS10685	0.75	-0.5
2,308,925	-		HGI48_RS10685	0.75	+0.3
2,308,925	-		HGI48_RS10685	0.75	-1.9
2,308,925	-		HGI48_RS10685	0.75	+1.1
2,308,978	+		HGI48_RS10685	0.90	+0.3
2,308,978	+		HGI48_RS10685	0.90	-1.2
2,308,978	+		HGI48_RS10685	0.90	+0.3
2,308,979	-				-0.7
2,308,992	-				-1.4
2,308,992	-				+1.5
2,308,996	+				+1.2
2,309,039	+				+0.2
2,309,071	+				-1.5
2,309,072	-				-0.0
2,309,072	-				-0.7
2,309,072	-				+1.9
2,309,074	-				-1.7
2,309,084	+				+0.5
2,309,084	+				+0.1
2,309,084	+				+0.9
2,309,088	-				-0.7
2,309,088	-				+0.2
2,309,088	-				+1.3
2,309,096	+				+0.1
2,309,096	+				+0.1
2,309,096	+				-1.2
2,309,096	+				-2.7
2,309,096	+				-0.3
2,309,096	+				+2.1
2,309,097	-				-0.7
2,309,098	+				+1.0
2,309,098	+				-1.3
2,309,122	+				+0.3
2,309,122	+				+0.3
2,309,123	-				+0.9
2,309,123	-				+0.9
2,309,125	-				+0.2
2,309,235	-				-2.3
2,309,237	+				-0.7
2,309,237	+				+0.4
2,309,237	+				-2.0
2,309,237	+				-2.5
2,309,238	-				-0.1
2,309,238	-				+0.3