Strain Fitness in Dickeya dianthicola 67-19 around HGI48_RS10550

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
2,275,461	+		HGI48_RS10540	0.82	-2.2
2,275,462	-		HGI48_RS10540	0.82	+0.4
2,275,463	+		HGI48_RS10540	0.82	-0.1
2,275,463	+		HGI48_RS10540	0.82	-0.4
2,275,463	+		HGI48_RS10540	0.82	-1.0
2,275,464	-		HGI48_RS10540	0.82	-0.4
2,275,464	-		HGI48_RS10540	0.82	-0.5
2,275,464	-		HGI48_RS10540	0.82	-0.7
2,275,505	+				+0.3
2,275,506	-		HGI48_RS10540	0.86	-0.2
2,275,506	-		HGI48_RS10540	0.86	-1.0
2,275,509	+		HGI48_RS10540	0.87	+0.6
2,275,509	+		HGI48_RS10540	0.87	+0.3
2,275,509	+				-1.3
2,275,509	+		HGI48_RS10540	0.87	+0.8
2,275,509	+		HGI48_RS10540	0.87	-0.7
2,275,509	+				+0.3
2,275,510	-		HGI48_RS10540	0.87	-1.7
2,275,511	+		HGI48_RS10540	0.87	-0.1
2,275,511	+				+0.7
2,275,511	+		HGI48_RS10540	0.87	+0.0
2,275,511	+		HGI48_RS10540	0.87	-0.7
2,275,511	+		HGI48_RS10540	0.87	-0.5
2,275,512	-		HGI48_RS10540	0.87	-0.7
2,275,512	-		HGI48_RS10540	0.87	-0.5
2,275,515	+				+3.2
2,275,516	-		HGI48_RS10540	0.87	-1.0
2,275,516	-		HGI48_RS10540	0.87	-0.3
2,275,635	+				-1.0
2,275,635	+				+0.7
2,275,636	-				+0.5
2,275,636	-				-0.5
2,275,719	+				+0.6
2,275,754	+				-1.7
2,275,754	+				+2.7
2,275,754	+				+0.3
2,275,757	-				-0.5
2,275,773	+				+0.0
2,275,814	+		HGI48_RS10545	0.13	+0.2
2,275,815	-		HGI48_RS10545	0.13	-2.9
2,275,815	-		HGI48_RS10545	0.13	-0.7
2,275,817	-		HGI48_RS10545	0.13	+0.0
2,275,817	-		HGI48_RS10545	0.13	-0.5
2,275,873	+		HGI48_RS10545	0.22	+0.7
2,275,874	-				-1.3
2,275,874	-				-1.3
2,276,013	-		HGI48_RS10545	0.44	-0.3
2,276,087	+		HGI48_RS10545	0.56	+0.2
2,276,087	+		HGI48_RS10545	0.56	+1.6
2,276,088	-		HGI48_RS10545	0.56	-0.5
2,276,088	-		HGI48_RS10545	0.56	+1.0
2,276,144	+		HGI48_RS10545	0.64	+0.3
2,276,145	-		HGI48_RS10545	0.65	-0.4
2,276,146	+		HGI48_RS10545	0.65	-0.0
2,276,146	+		HGI48_RS10545	0.65	-0.9
2,276,146	+		HGI48_RS10545	0.65	-2.3
2,276,146	+		HGI48_RS10545	0.65	+0.1
2,276,146	+		HGI48_RS10545	0.65	-0.4
2,276,147	-		HGI48_RS10545	0.65	-1.5
2,276,369	+				-0.5
2,276,370	-				+0.6
2,276,370	-				-0.3
2,276,370	-				+2.3
2,276,385	+				+0.7
2,276,386	-				-0.3
2,276,386	-				+0.4
2,276,386	-				-2.0
2,276,397	+				+0.4
2,276,801	+		HGI48_RS10550	0.61	-1.5
2,276,808	-		HGI48_RS10550	0.62	-0.8
2,276,862	-		HGI48_RS10550	0.70	-0.5
2,277,081	-				+0.1
2,277,081	-				-0.7
2,277,463	+		HGI48_RS10555	0.62	+0.3
2,277,464	-		HGI48_RS10555	0.62	-2.7
2,277,464	-		HGI48_RS10555	0.62	-0.5
2,277,511	+		HGI48_RS10555	0.69	+0.3
2,277,538	+		HGI48_RS10555	0.74	-0.5
2,277,538	+		HGI48_RS10555	0.74	-0.6
2,277,587	+		HGI48_RS10555	0.81	-2.5
2,277,817	+				-1.7
2,278,067	+		HGI48_RS10560	0.34	+1.6