Strain Fitness in Dickeya dianthicola 67-19 around HGI48_RS10310

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
2,223,546	-				-2.0
2,223,606	+				-0.7
2,223,695	-				+0.0
2,223,755	-				-2.0
2,223,774	-				+1.4
2,223,991	-		HGI48_RS10305	0.27	-0.0
2,224,143	+		HGI48_RS10305	0.54	-1.3
2,224,318	+		HGI48_RS10305	0.86	-0.3
2,224,318	+		HGI48_RS10305	0.86	-0.4
2,224,319	-		HGI48_RS10305	0.86	-1.7
2,224,338	+		HGI48_RS10305	0.89	+0.3
2,224,368	+				-0.2
2,224,388	-				-2.9
2,224,388	-				+0.3
2,224,388	-				-0.4
2,224,388	-				-0.9
2,224,394	-				+0.9
2,224,403	-				-0.1
2,224,567	-				-0.1
2,224,639	+				-1.7
2,224,640	-				+0.6
2,224,640	-				-1.2
2,224,809	-		HGI48_RS10310	0.17	-0.1
2,224,831	+		HGI48_RS10310	0.18	-0.1
2,225,017	+		HGI48_RS10310	0.28	+0.3
2,225,017	+		HGI48_RS10310	0.28	-1.7
2,225,018	-				+0.9
2,225,018	-		HGI48_RS10310	0.28	+0.6
2,225,018	-		HGI48_RS10310	0.28	+0.1
2,225,019	+		HGI48_RS10310	0.28	+0.6
2,225,019	+		HGI48_RS10310	0.28	-0.9
2,225,019	+		HGI48_RS10310	0.28	-0.0
2,225,020	-		HGI48_RS10310	0.28	+0.2
2,225,314	+		HGI48_RS10310	0.43	-0.9
2,225,315	-		HGI48_RS10310	0.43	-0.4
2,225,316	+		HGI48_RS10310	0.43	-0.3
2,225,317	-		HGI48_RS10310	0.43	-1.0
2,225,317	-				+2.3
2,225,317	-		HGI48_RS10310	0.43	-0.3
2,225,323	-		HGI48_RS10310	0.44	-2.0
2,225,437	+		HGI48_RS10310	0.50	-1.3
2,225,457	+		HGI48_RS10310	0.51	+0.5
2,225,458	-		HGI48_RS10310	0.51	+0.8
2,225,458	-		HGI48_RS10310	0.51	-0.5
2,225,686	+		HGI48_RS10310	0.63	-2.7
2,225,686	+				-0.3
2,225,707	+		HGI48_RS10310	0.64	-0.0
2,225,707	+		HGI48_RS10310	0.64	-1.7
2,225,708	-		HGI48_RS10310	0.64	+0.6
2,225,742	+		HGI48_RS10310	0.66	-0.2
2,225,743	-		HGI48_RS10310	0.66	-0.5
2,226,118	+				+1.6
2,226,120	+		HGI48_RS10310	0.85	-0.1
2,226,120	+		HGI48_RS10310	0.85	+0.3
2,226,120	+		HGI48_RS10310	0.85	-0.5
2,226,120	+		HGI48_RS10310	0.85	+1.3
2,226,121	-				-1.3
2,226,285	+				-0.4
2,226,285	+				+1.3
2,226,285	+				-1.4
2,226,286	-				+0.1
2,226,286	-				-0.4
2,226,286	-				-0.1
2,226,312	+				+0.3
2,226,312	+				-1.7
2,226,312	+				-0.2
2,226,312	+				+0.0
2,226,313	-				+0.6
2,226,403	+				+0.3
2,226,454	+		HGI48_RS10315	0.11	+0.0
2,226,455	-		HGI48_RS10315	0.11	+0.3
2,226,494	+		HGI48_RS10315	0.21	-0.6
2,226,694	-		HGI48_RS10315	0.71	+0.9
2,226,694	-				-1.3
2,226,694	-				+0.7
2,226,804	+				-1.3
2,226,810	+				-0.6
2,226,965	+		HGI48_RS10320	0.14	-0.0
2,226,965	+				-0.3
2,227,215	-		HGI48_RS10320	0.45	+0.1
2,227,273	+				+0.3
2,227,274	-		HGI48_RS10320	0.52	+0.6