Strain Fitness in Dickeya dianthicola 67-19 around HGI48_RS10290

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
2,218,908	-				-1.3
2,218,916	+				+1.3
2,218,916	+				+0.5
2,218,917	-				-0.4
2,218,941	+				-0.9
2,218,941	+				+0.1
2,218,941	+				+0.3
2,218,942	-				+0.7
2,218,947	+				-1.3
2,218,995	-				-1.4
2,219,000	+				-0.7
2,219,001	-				-0.0
2,219,044	-				+0.3
2,219,116	+				-2.0
2,219,116	+				+0.0
2,219,117	-				-0.1
2,219,117	-				+0.8
2,219,131	-				-0.6
2,219,131	-				+0.3
2,219,181	-				-0.3
2,219,201	-		HGI48_RS10280	0.27	-0.4
2,219,267	+		HGI48_RS10280	0.42	-1.0
2,219,267	+				+0.9
2,219,267	+		HGI48_RS10280	0.42	-0.3
2,219,268	-		HGI48_RS10280	0.43	-0.2
2,219,268	-		HGI48_RS10280	0.43	-2.3
2,219,350	+		HGI48_RS10280	0.62	-0.3
2,219,351	-		HGI48_RS10280	0.63	-2.3
2,219,351	-		HGI48_RS10280	0.63	+0.5
2,219,351	-		HGI48_RS10280	0.63	-2.5
2,219,522	-				-2.0
2,219,522	-				-0.4
2,219,588	+				-0.3
2,219,589	-				-1.4
2,219,591	+				-0.6
2,219,598	+				-0.2
2,219,706	+		HGI48_RS10285	0.49	-0.0
2,219,706	+		HGI48_RS10285	0.49	+0.1
2,219,707	-		HGI48_RS10285	0.49	-0.0
2,219,707	-		HGI48_RS10285	0.49	-0.3
2,219,728	-		HGI48_RS10285	0.57	+1.0
2,219,817	+		HGI48_RS10285	0.89	-2.7
2,219,817	+		HGI48_RS10285	0.89	+0.3
2,219,817	+		HGI48_RS10285	0.89	+0.1
2,219,817	+		HGI48_RS10285	0.89	+0.0
2,219,818	-		HGI48_RS10285	0.89	-2.2
2,219,820	+				-0.7
2,219,820	+				-0.3
2,219,820	+				+1.3
2,219,821	-				-0.3
2,219,821	-				+0.5
2,219,821	-				+0.3
2,219,821	-				+0.9
2,219,845	+				+1.1
2,219,887	+				-0.7
2,219,888	-				+1.3
2,219,894	+				-1.9
2,219,895	-				+0.3
2,219,913	+				+1.0
2,219,913	+				+1.9
2,220,019	+		HGI48_RS10290	0.20	+0.6
2,220,019	+		HGI48_RS10290	0.20	-0.3
2,220,019	+		HGI48_RS10290	0.20	-1.2
2,220,020	-		HGI48_RS10290	0.20	-1.2
2,220,060	+		HGI48_RS10290	0.26	-0.6
2,220,062	+		HGI48_RS10290	0.26	-0.9
2,220,062	+		HGI48_RS10290	0.26	+0.0
2,220,063	-		HGI48_RS10290	0.26	-0.9
2,220,063	-		HGI48_RS10290	0.26	+0.8
2,220,134	+		HGI48_RS10290	0.38	-0.7
2,220,134	+		HGI48_RS10290	0.38	+0.1
2,220,135	-		HGI48_RS10290	0.38	-2.0
2,220,135	-		HGI48_RS10290	0.38	-0.1
2,220,150	+		HGI48_RS10290	0.40	-0.4
2,220,180	-		HGI48_RS10290	0.45	-2.5
2,220,223	+		HGI48_RS10290	0.51	-0.4
2,220,275	-		HGI48_RS10290	0.60	-0.0
2,220,517	+				+1.0
2,220,535	-				+0.3
2,220,548	+				-1.4
2,220,548	+				-0.3
2,220,548	+				-1.4
2,220,548	+				-0.0
2,220,548	+				-2.0
2,220,549	-				-0.3
2,220,549	-				+0.5
2,220,549	-				+0.1
2,220,560	+				+0.6
2,220,596	+				+0.4
2,220,596	+				+0.2
2,220,597	-				-0.4
2,220,679	+				+0.2
2,220,679	+				-0.1
2,220,680	-				-0.4
2,220,683	+				+1.5
2,220,683	+				-0.3
2,220,684	-				-2.9
2,220,717	+		HGI48_RS10295	0.12	-0.2
2,220,717	+		HGI48_RS10295	0.12	+0.4
2,220,718	-		HGI48_RS10295	0.12	-1.0
2,220,811	-		HGI48_RS10295	0.21	-0.1
2,220,815	-		HGI48_RS10295	0.22	+0.0
2,220,890	+		HGI48_RS10295	0.29	-0.7
2,220,890	+		HGI48_RS10295	0.29	-0.5
2,220,973	+				+1.0
2,220,974	-		HGI48_RS10295	0.37	+0.1
2,221,090	-		HGI48_RS10295	0.49	-0.1
2,221,205	+		HGI48_RS10295	0.60	+0.7
2,221,205	+		HGI48_RS10295	0.60	+0.8
2,221,206	-		HGI48_RS10295	0.60	-2.3
2,221,370	+				+2.1
2,221,370	+		HGI48_RS10295	0.76	-1.7
2,221,380	-		HGI48_RS10295	0.77	+0.1
2,221,450	+				+0.3
2,221,451	-		HGI48_RS10295	0.84	+0.1
2,221,451	-		HGI48_RS10295	0.84	+0.0
2,221,454	+		HGI48_RS10295	0.84	-0.1
2,221,454	+		HGI48_RS10295	0.84	+1.4
2,221,454	+				-0.3
2,221,455	-		HGI48_RS10295	0.84	-1.0
2,221,455	-		HGI48_RS10295	0.84	-2.7
2,221,455	-		HGI48_RS10295	0.84	-2.7
2,221,455	-		HGI48_RS10295	0.84	-1.7
2,221,455	-				+1.9
2,221,455	-		HGI48_RS10295	0.84	-0.0