Strain Fitness in Dickeya dianthicola 67-19 around HGI48_RS09330

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
2,002,804	-				-1.7
2,002,804	-				-1.6
2,002,804	-				+0.0
2,002,857	+				-0.4
2,002,857	+				+1.8
2,002,857	+				-0.0
2,002,857	+				-0.2
2,002,857	+				+0.3
2,002,858	-				-0.0
2,002,858	-				-0.5
2,002,858	-				+0.7
2,002,860	+				+0.5
2,002,971	+				+2.3
2,002,972	-		HGI48_RS09325	0.19	-0.9
2,002,972	-		HGI48_RS09325	0.19	-1.0
2,002,999	-		HGI48_RS09325	0.21	+0.2
2,003,045	+		HGI48_RS09325	0.26	-1.7
2,003,046	-				-0.3
2,003,086	-		HGI48_RS09325	0.30	+0.3
2,003,157	+		HGI48_RS09325	0.37	+0.3
2,003,158	-		HGI48_RS09325	0.37	-1.3
2,003,158	-		HGI48_RS09325	0.37	-0.1
2,003,188	+		HGI48_RS09325	0.40	-2.3
2,003,188	+				+0.9
2,003,188	+		HGI48_RS09325	0.40	-0.6
2,003,188	+		HGI48_RS09325	0.40	-0.3
2,003,188	+		HGI48_RS09325	0.40	-0.4
2,003,188	+		HGI48_RS09325	0.40	+0.6
2,003,189	-		HGI48_RS09325	0.40	-0.4
2,003,189	-		HGI48_RS09325	0.40	-1.0
2,003,190	+				+2.6
2,003,190	+		HGI48_RS09325	0.40	-1.3
2,003,190	+		HGI48_RS09325	0.40	-1.6
2,003,191	-		HGI48_RS09325	0.41	-1.3
2,003,191	-		HGI48_RS09325	0.41	+0.7
2,003,191	-		HGI48_RS09325	0.41	-2.5
2,003,191	-		HGI48_RS09325	0.41	-2.3
2,003,191	-		HGI48_RS09325	0.41	-0.7
2,003,191	-		HGI48_RS09325	0.41	-0.4
2,003,191	-		HGI48_RS09325	0.41	-0.4
2,003,191	-		HGI48_RS09325	0.41	-0.4
2,003,255	-		HGI48_RS09325	0.47	+0.0
2,003,308	+		HGI48_RS09325	0.52	-0.1
2,003,308	+		HGI48_RS09325	0.52	+0.0
2,003,309	-		HGI48_RS09325	0.52	-0.7
2,003,309	-		HGI48_RS09325	0.52	+0.5
2,003,337	+		HGI48_RS09325	0.55	-1.4
2,003,337	+		HGI48_RS09325	0.55	+0.1
2,003,337	+		HGI48_RS09325	0.55	+0.4
2,003,408	+		HGI48_RS09325	0.62	+0.6
2,003,409	-		HGI48_RS09325	0.62	+0.3
2,003,409	-		HGI48_RS09325	0.62	-0.3
2,003,626	+		HGI48_RS09325	0.84	-2.3
2,003,626	+		HGI48_RS09325	0.84	-0.2
2,003,718	+				+0.3
2,003,718	+				+0.3
2,003,804	+				-0.5
2,003,805	-				-0.0
2,003,809	+				-2.1
2,003,809	+				-0.4
2,003,809	+				+1.0
2,003,809	+				+0.6
2,003,810	-				-1.3
2,003,810	-				+3.5
2,003,925	-				+0.1
2,003,925	-				-1.4
2,003,925	-				+0.4
2,003,967	+		HGI48_RS09330	0.12	-0.4
2,003,968	-		HGI48_RS09330	0.12	+0.4
2,003,971	+		HGI48_RS09330	0.13	-0.5
2,003,972	-		HGI48_RS09330	0.13	-2.3
2,003,972	-		HGI48_RS09330	0.13	-0.3
2,004,031	+		HGI48_RS09330	0.17	-2.3
2,004,032	-		HGI48_RS09330	0.17	-0.2
2,004,032	-		HGI48_RS09330	0.17	+0.9
2,004,032	-		HGI48_RS09330	0.17	-2.0
2,004,459	+		HGI48_RS09330	0.45	-1.3
2,004,459	+		HGI48_RS09330	0.45	-2.0
2,004,459	+				-0.3
2,004,460	-		HGI48_RS09330	0.45	-1.3
2,004,543	+		HGI48_RS09330	0.51	-1.0
2,004,544	-				+0.3
2,004,687	+		HGI48_RS09330	0.60	-1.0
2,004,688	-		HGI48_RS09330	0.60	-2.0
2,004,902	-		HGI48_RS09330	0.74	+0.2
2,004,975	+		HGI48_RS09330	0.79	-0.0
2,004,976	-		HGI48_RS09330	0.79	-0.7
2,004,976	-		HGI48_RS09330	0.79	-2.3
2,005,015	+		HGI48_RS09330	0.82	-0.4
2,005,015	+		HGI48_RS09330	0.82	+0.3
2,005,109	+		HGI48_RS09330	0.88	+0.8
2,005,119	-		HGI48_RS09330	0.89	-1.1
2,005,185	+				-0.9
2,005,290	+				+0.9
2,005,290	+				-0.3
2,005,290	+				+0.3
2,005,290	+				-0.9
2,005,290	+				-1.3
2,005,290	+				+0.3
2,005,291	-				+0.9
2,005,291	-				+0.6
2,005,388	+				-1.6
2,005,388	+				+0.3
2,005,388	+				-1.7
2,005,495	+				+0.7
2,005,500	+				-1.1
2,005,501	-				-0.4
2,005,501	-				-2.5
2,005,523	+				-0.3
2,005,524	-				-1.9
2,005,524	-				-0.0
2,005,565	+				-1.5
2,005,570	+				-0.7
2,005,571	-				-2.7
2,005,571	-				+0.3
2,005,586	+				-0.3
2,005,608	+				-0.7
2,005,608	+				-0.1
2,005,612	+				-0.3
2,005,612	+				+0.3
2,005,613	-				+1.3
2,005,613	-				-1.7
2,005,613	-				-1.4
2,005,613	-				-0.3
2,005,613	-				-1.7
2,005,672	+				-1.1
2,005,693	+				-0.5
2,005,693	+				-0.9
2,005,694	-				-0.5
2,005,743	+				-2.0
2,005,744	-				+1.0
2,006,097	+				+1.9
2,006,172	-		HGI48_RS09335	0.43	-0.3
2,006,196	+		HGI48_RS09335	0.45	-0.5
2,006,196	+		HGI48_RS09335	0.45	-0.6
2,006,197	-		HGI48_RS09335	0.46	+1.6
2,006,220	-		HGI48_RS09335	0.48	+1.5
2,006,235	+				+1.6
2,006,236	-				-0.3
2,006,251	+		HGI48_RS09335	0.51	+0.3
2,006,252	-		HGI48_RS09335	0.51	+0.3
2,006,252	-				+1.3