Strain Fitness in Dickeya dianthicola 67-19 around HGI48_RS09255

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
1,984,763	-				-0.8
1,984,763	-				-1.3
1,984,811	-		HGI48_RS09245	0.12	-0.3
1,984,965	+		HGI48_RS09245	0.39	+0.3
1,984,966	-		HGI48_RS09245	0.39	-1.3
1,984,998	-		HGI48_RS09245	0.45	+1.1
1,985,036	+		HGI48_RS09245	0.51	+0.5
1,985,036	+		HGI48_RS09245	0.51	+0.1
1,985,036	+		HGI48_RS09245	0.51	-0.3
1,985,037	-		HGI48_RS09245	0.51	-0.9
1,985,039	-		HGI48_RS09245	0.52	-0.1
1,985,039	-		HGI48_RS09245	0.52	+0.5
1,985,047	+		HGI48_RS09245	0.53	+1.1
1,985,047	+		HGI48_RS09245	0.53	-1.3
1,985,048	-		HGI48_RS09245	0.53	-0.3
1,985,071	+		HGI48_RS09245	0.57	-0.1
1,985,071	+		HGI48_RS09245	0.57	+0.3
1,985,071	+		HGI48_RS09245	0.57	-0.3
1,985,071	+		HGI48_RS09245	0.57	-1.0
1,985,071	+		HGI48_RS09245	0.57	-0.3
1,985,071	+		HGI48_RS09245	0.57	-0.1
1,985,071	+		HGI48_RS09245	0.57	-1.3
1,985,072	-		HGI48_RS09245	0.57	+0.8
1,985,072	-		HGI48_RS09245	0.57	-1.7
1,985,072	-		HGI48_RS09245	0.57	-1.3
1,985,088	-		HGI48_RS09245	0.60	-1.0
1,985,089	+		HGI48_RS09245	0.60	-0.5
1,985,089	+		HGI48_RS09245	0.60	+0.2
1,985,089	+		HGI48_RS09245	0.60	-1.4
1,985,090	-		HGI48_RS09245	0.61	-0.1
1,985,090	-		HGI48_RS09245	0.61	-0.1
1,985,090	-		HGI48_RS09245	0.61	-0.2
1,985,161	-		HGI48_RS09245	0.73	-1.1
1,985,201	-		HGI48_RS09245	0.80	-0.0
1,985,201	-		HGI48_RS09245	0.80	-1.0
1,985,243	+		HGI48_RS09245	0.87	+1.3
1,985,251	-				+0.3
1,985,272	+				+1.3
1,985,272	+				-1.1
1,985,272	+				-1.3
1,985,273	-				+1.0
1,985,322	+				+0.9
1,985,322	+				-0.2
1,985,322	+				+1.5
1,985,323	-				+1.1
1,985,323	-				+1.2
1,985,323	-				-1.3
1,985,323	-				-0.9
1,985,328	-				-2.0
1,985,372	+				-2.0
1,985,372	+				+0.1
1,985,373	-				-0.5
1,985,454	+				+0.3
1,985,496	+				-0.4
1,985,547	+		HGI48_RS09250	0.17	+1.2
1,985,547	+		HGI48_RS09250	0.17	+0.5
1,985,548	-		HGI48_RS09250	0.18	-1.7
1,985,688	+		HGI48_RS09250	0.73	-0.2
1,985,727	+		HGI48_RS09250	0.88	-0.6
1,985,728	-		HGI48_RS09250	0.88	-0.7
1,985,728	-		HGI48_RS09250	0.88	+0.3
1,985,736	-				+1.2
1,985,839	+				-0.8
1,985,839	+				+0.5
1,985,839	+				+1.2
1,985,840	-				-0.3
1,985,840	-				+0.3
1,985,840	-				-0.4
1,985,882	+		HGI48_RS09255	0.10	-0.1
1,985,883	-		HGI48_RS09255	0.10	-2.5
1,985,883	-				+0.9
1,985,960	-		HGI48_RS09255	0.17	-0.2
1,986,221	-		HGI48_RS09255	0.39	+1.0
1,986,221	-		HGI48_RS09255	0.39	-0.5
1,986,231	-		HGI48_RS09255	0.40	-0.0
1,986,231	-		HGI48_RS09255	0.40	-0.5
1,986,231	-		HGI48_RS09255	0.40	+0.2
1,986,242	-				+0.7
1,986,242	-		HGI48_RS09255	0.41	-0.4
1,986,242	-		HGI48_RS09255	0.41	-2.3
1,986,269	+		HGI48_RS09255	0.43	-2.3
1,986,367	-		HGI48_RS09255	0.51	-0.7
1,986,419	-		HGI48_RS09255	0.55	+0.1
1,986,632	-		HGI48_RS09255	0.74	-0.4
1,986,635	+		HGI48_RS09255	0.74	-1.7
1,986,635	+		HGI48_RS09255	0.74	+0.1
1,986,635	+				-1.3
1,986,649	+		HGI48_RS09255	0.75	-1.1
1,986,649	+				+2.2
1,986,649	+		HGI48_RS09255	0.75	-0.7
1,986,650	-		HGI48_RS09255	0.75	+0.5
1,986,776	-		HGI48_RS09255	0.86	-0.7
1,986,776	-		HGI48_RS09255	0.86	-1.1
1,986,825	+		HGI48_RS09255	0.90	+0.8
1,986,990	+				+0.1
1,986,995	+				-2.0
1,986,996	-				+0.4
1,987,008	+				+1.2
1,987,049	-				-0.4
1,987,130	+				+0.7
1,987,130	+				+0.5
1,987,135	-				-0.3
1,987,151	+				-0.4
1,987,152	-				+1.1
1,987,152	-				-1.3
1,987,155	+				-0.9
1,987,156	-				-0.3
1,987,156	-				+0.1
1,987,156	-				+0.3
1,987,279	+				-1.3
1,987,279	+				-0.7
1,987,280	-				+1.1
1,987,303	+				+0.2
1,987,303	+				+0.5
1,987,311	+				+0.7
1,987,311	+				-0.7
1,987,312	-				-1.4
1,987,394	+		HGI48_RS09260	0.10	-1.8
1,987,394	+		HGI48_RS09260	0.10	+0.1
1,987,395	-		HGI48_RS09260	0.10	-0.1
1,987,395	-		HGI48_RS09260	0.10	-0.4
1,987,432	+		HGI48_RS09260	0.13	-0.6
1,987,433	-				+0.3
1,987,433	-		HGI48_RS09260	0.13	-0.2
1,987,436	+		HGI48_RS09260	0.14	-0.6
1,987,437	-		HGI48_RS09260	0.14	-1.3
1,987,437	-		HGI48_RS09260	0.14	-0.4
1,987,437	-		HGI48_RS09260	0.14	+0.3
1,987,450	+		HGI48_RS09260	0.15	-0.2
1,987,450	+		HGI48_RS09260	0.15	-2.1
1,987,451	-				+0.3
1,987,456	+				-0.3
1,987,457	-		HGI48_RS09260	0.16	+1.3
1,987,457	-		HGI48_RS09260	0.16	+0.3
1,987,457	-		HGI48_RS09260	0.16	+0.4
1,987,560	-		HGI48_RS09260	0.25	+0.5
1,987,560	-		HGI48_RS09260	0.25	-0.7
1,987,560	-		HGI48_RS09260	0.25	-0.5
1,987,733	-				+0.7
1,987,733	-				+1.3