Strain Fitness in Dickeya dianthicola 67-19 around HGI48_RS08255

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
1,771,735	+		HGI48_RS08245	0.85	+0.4
1,771,735	+		HGI48_RS08245	0.85	-0.7
1,771,735	+		HGI48_RS08245	0.85	-0.0
1,771,735	+				-1.2
1,771,767	+		HGI48_RS08245	0.88	-0.8
1,771,767	+		HGI48_RS08245	0.88	-1.8
1,771,823	+				-1.1
1,771,823	+				+0.0
1,771,823	+				-0.6
1,771,824	-				-1.6
1,771,824	-				+0.7
1,771,824	-				-0.6
1,771,824	-				-0.9
1,771,824	-				-2.2
1,771,861	-				+0.1
1,771,885	+				-0.1
1,771,886	-				-0.9
1,771,888	+				+0.6
1,771,912	-				-1.6
1,771,923	-				+1.0
1,771,965	-				+0.4
1,771,966	+				+0.1
1,771,966	+				+0.5
1,771,966	+				-0.5
1,771,971	+				-1.6
1,771,971	+				+0.8
1,771,971	+				+0.5
1,771,971	+				+1.0
1,771,971	+				+2.0
1,772,123	+		HGI48_RS08250	0.16	-2.2
1,772,156	+		HGI48_RS08250	0.21	-1.4
1,772,157	-		HGI48_RS08250	0.21	-0.8
1,772,221	+		HGI48_RS08250	0.30	-0.9
1,772,359	+		HGI48_RS08250	0.49	-1.9
1,772,359	+		HGI48_RS08250	0.49	-0.4
1,772,360	-		HGI48_RS08250	0.50	-0.4
1,772,360	-				+1.0
1,772,501	-		HGI48_RS08250	0.69	+0.0
1,772,531	-		HGI48_RS08250	0.73	-1.6
1,772,533	+		HGI48_RS08250	0.74	-0.1
1,772,534	-		HGI48_RS08250	0.74	-0.3
1,772,596	-		HGI48_RS08250	0.82	-0.6
1,772,636	+		HGI48_RS08250	0.88	-0.6
1,772,674	-				+0.5
1,772,706	+				-2.1
1,772,706	+				+1.0
1,772,706	+				+0.0
1,772,707	-				+0.1
1,772,719	+				+1.2
1,772,720	-				+0.3
1,772,720	-				-0.2
1,772,720	-				-0.5
1,772,729	+				+0.2
1,772,730	-				-1.0
1,772,730	-				-1.4
1,772,813	+		HGI48_RS08255	0.22	+0.4
1,772,813	+				+0.8
1,772,840	+		HGI48_RS08255	0.29	-0.9
1,772,906	-				+0.4
1,772,906	-		HGI48_RS08255	0.44	+0.3
1,772,906	-		HGI48_RS08255	0.44	+0.6
1,772,906	-				+1.4
1,772,906	-		HGI48_RS08255	0.44	+1.2
1,772,942	+				+1.1
1,772,943	-		HGI48_RS08255	0.53	-2.4
1,772,964	+		HGI48_RS08255	0.58	-0.2
1,773,012	+		HGI48_RS08255	0.69	-1.0
1,773,034	+		HGI48_RS08255	0.74	-0.2
1,773,034	+				-0.2
1,773,035	-		HGI48_RS08255	0.74	+0.2
1,773,035	-		HGI48_RS08255	0.74	-0.6
1,773,035	-		HGI48_RS08255	0.74	-1.2
1,773,035	-		HGI48_RS08255	0.74	+0.8
1,773,035	-		HGI48_RS08255	0.74	-0.9
1,773,065	+		HGI48_RS08255	0.81	-1.2
1,773,066	-		HGI48_RS08255	0.82	+1.5
1,773,104	+				-1.5
1,773,104	+				-1.2
1,773,104	+				-0.2
1,773,104	+				-2.2
1,773,105	-				+0.6
1,773,141	+				+1.0
1,773,173	+				+0.9
1,773,173	+				-1.2
1,773,173	+				+0.4
1,773,173	+				-0.0
1,773,173	+				-1.4
1,773,173	+				+0.8
1,773,173	+				-0.2
1,773,174	-				-0.1
1,773,174	-				-2.6
1,773,174	-				-0.1
1,773,174	-				+0.6
1,773,174	-				-0.3
1,773,174	-				-0.6
1,773,174	-				+0.8
1,773,176	-				+0.1
1,773,176	-				-0.2
1,773,176	-				+0.4
1,773,176	-				+0.4
1,773,214	+				+0.1
1,773,215	-				-0.6
1,773,215	-				-0.2
1,773,388	+				+1.0
1,773,388	+				-0.0
1,773,419	+				-0.2
1,773,420	-				-0.1
1,773,422	-				-1.6
1,773,514	-				-0.4
1,773,582	-				+1.1
1,773,630	+				+0.5
1,773,696	+				-1.2
1,773,696	+				+0.1
1,773,696	+				+0.1
1,773,696	+				-0.0
1,773,696	+				-0.6
1,773,696	+				-2.4
1,773,696	+				-1.2
1,773,696	+				+0.2
1,773,696	+				-0.1
1,773,697	-				-0.3
1,773,697	-				-1.9
1,773,697	-				+0.8
1,773,697	-				+0.8
1,773,697	-				-0.6
1,773,697	-				-0.2
1,773,761	+		HGI48_RS08260	0.13	-0.6
1,773,761	+		HGI48_RS08260	0.13	-0.4
1,773,762	-		HGI48_RS08260	0.13	+0.3
1,773,762	-		HGI48_RS08260	0.13	+0.6
1,773,880	+		HGI48_RS08260	0.24	+0.9
1,773,880	+		HGI48_RS08260	0.24	+1.5
1,773,880	+		HGI48_RS08260	0.24	-1.0
1,773,880	+		HGI48_RS08260	0.24	-0.1
1,773,880	+				-0.2
1,773,881	-		HGI48_RS08260	0.24	-1.6
1,773,881	-		HGI48_RS08260	0.24	+0.1
1,773,881	-				+0.8
1,773,882	+		HGI48_RS08260	0.24	-0.4
1,773,882	+		HGI48_RS08260	0.24	-0.4
1,773,910	+		HGI48_RS08260	0.27	-0.4
1,773,991	+		HGI48_RS08260	0.35	-0.4
1,774,027	-		HGI48_RS08260	0.38	-0.3
1,774,027	-		HGI48_RS08260	0.38	-0.7
1,774,027	-		HGI48_RS08260	0.38	+0.2
1,774,027	-		HGI48_RS08260	0.38	+0.7
1,774,124	+		HGI48_RS08260	0.48	+0.7
1,774,124	+		HGI48_RS08260	0.48	-0.1
1,774,125	-		HGI48_RS08260	0.48	+0.2
1,774,140	+		HGI48_RS08260	0.49	+0.4
1,774,141	-		HGI48_RS08260	0.49	-1.9