Strain Fitness in Dickeya dianthicola 67-19 around HGI48_RS07945

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
1,701,696	+				+0.1
1,701,696	+				-0.3
1,701,813	+				-0.6
1,701,830	+				-0.1
1,702,227	+				+0.8
1,702,242	+				-0.6
1,702,242	+				-0.0
1,702,242	+				-0.6
1,702,244	+				+0.4
1,702,276	+				+0.4
1,702,277	-				+1.2
1,702,306	+				-0.3
1,702,337	-				-0.4
1,702,490	+				-1.0
1,702,491	-				+0.6
1,702,491	-				+0.1
1,702,547	-				-0.6
1,702,547	-				+0.4
1,702,547	-				-0.9
1,702,557	+				-0.1
1,702,558	-				-1.4
1,702,558	-				+0.6
1,702,558	-				-0.2
1,702,628	-				-1.6
1,702,652	-				+0.1
1,702,652	-				+0.6
1,702,652	-				+0.3
1,702,660	-				-0.4
1,702,712	+				+0.4
1,702,712	+				+1.4
1,702,713	-				-0.4
1,702,715	+				-0.9
1,702,716	-				+0.4
1,702,716	-				-0.8
1,702,716	-				-0.6
1,702,721	+				+1.0
1,702,722	-		HGI48_RS07945	0.11	+0.1
1,702,725	+		HGI48_RS07945	0.11	+1.6
1,702,725	+		HGI48_RS07945	0.11	+0.2
1,702,725	+				+1.1
1,702,726	-		HGI48_RS07945	0.12	-0.1
1,702,793	+		HGI48_RS07945	0.25	+0.6
1,702,793	+				-0.6
1,702,911	-		HGI48_RS07945	0.48	-1.9
1,702,911	-		HGI48_RS07945	0.48	-0.6
1,703,072	+		HGI48_RS07945	0.80	-0.4
1,703,072	+		HGI48_RS07945	0.80	+0.1
1,703,073	-		HGI48_RS07945	0.80	-0.9
1,703,073	-		HGI48_RS07945	0.80	-0.5
1,703,170	-				-0.1
1,703,308	+				+0.6
1,703,308	+				+0.3
1,703,308	+				+0.9
1,703,309	-				+1.0
1,703,309	-				+0.4
1,703,309	-				+0.1
1,703,310	+				-1.2
1,703,311	-				-0.6
1,703,311	-				+0.3
1,703,311	-				-0.1
1,703,403	+		HGI48_RS07950	0.14	-0.3
1,703,403	+				+0.8
1,703,403	+		HGI48_RS07950	0.14	-0.3
1,703,404	-		HGI48_RS07950	0.14	+0.7
1,703,404	-		HGI48_RS07950	0.14	-0.2
1,703,404	-		HGI48_RS07950	0.14	-0.6
1,703,404	-		HGI48_RS07950	0.14	-0.9
1,703,447	+		HGI48_RS07950	0.16	+0.9
1,703,447	+		HGI48_RS07950	0.16	-1.2
1,703,448	-		HGI48_RS07950	0.17	-0.5
1,703,448	-		HGI48_RS07950	0.17	+1.0
1,703,604	+		HGI48_RS07950	0.27	-0.0
1,703,633	-		HGI48_RS07950	0.29	-0.3
1,703,633	-		HGI48_RS07950	0.29	+0.8
1,703,731	+		HGI48_RS07950	0.36	+0.4
1,703,731	+		HGI48_RS07950	0.36	+0.7
1,703,731	+		HGI48_RS07950	0.36	-0.1
1,703,731	+		HGI48_RS07950	0.36	+0.5
1,703,731	+		HGI48_RS07950	0.36	-0.1
1,703,732	-		HGI48_RS07950	0.36	-0.2
1,703,732	-		HGI48_RS07950	0.36	+1.1
1,703,812	-				+0.4
1,703,983	+		HGI48_RS07950	0.53	+0.4
1,703,984	-		HGI48_RS07950	0.53	-1.0
1,703,984	-		HGI48_RS07950	0.53	-1.8
1,704,016	+		HGI48_RS07950	0.55	+0.1
1,704,016	+		HGI48_RS07950	0.55	+0.7
1,704,016	+		HGI48_RS07950	0.55	-0.6
1,704,016	+		HGI48_RS07950	0.55	-2.1
1,704,017	-		HGI48_RS07950	0.55	-2.4
1,704,017	-		HGI48_RS07950	0.55	-0.6
1,704,017	-		HGI48_RS07950	0.55	+0.4
1,704,017	-		HGI48_RS07950	0.55	-0.9
1,704,017	-		HGI48_RS07950	0.55	-0.1
1,704,017	-		HGI48_RS07950	0.55	-0.0
1,704,017	-		HGI48_RS07950	0.55	-0.4
1,704,017	-		HGI48_RS07950	0.55	+1.8
1,704,017	-		HGI48_RS07950	0.55	+0.6
1,704,017	-		HGI48_RS07950	0.55	-0.2
1,704,038	-		HGI48_RS07950	0.56	+0.4
1,704,077	-				+0.4
1,704,077	-				-0.2
1,704,077	-		HGI48_RS07950	0.59	-1.2
1,704,077	-		HGI48_RS07950	0.59	+1.6
1,704,146	-		HGI48_RS07950	0.64	-0.6
1,704,146	-		HGI48_RS07950	0.64	+0.8
1,704,146	-		HGI48_RS07950	0.64	+0.8
1,704,146	-		HGI48_RS07950	0.64	-0.1
1,704,146	-				+0.8