Strain Fitness in Dickeya dianthicola 67-19 around HGI48_RS07705

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
1,647,177	+		HGI48_RS07700	0.70	-0.1
1,647,178	-		HGI48_RS07700	0.70	-1.6
1,647,208	+		HGI48_RS07700	0.71	+0.0
1,647,209	-		HGI48_RS07700	0.71	-1.6
1,647,209	-		HGI48_RS07700	0.71	-0.0
1,647,211	+		HGI48_RS07700	0.71	-0.0
1,647,212	-		HGI48_RS07700	0.71	-1.0
1,647,212	-		HGI48_RS07700	0.71	+1.0
1,647,212	-		HGI48_RS07700	0.71	+0.0
1,647,303	-		HGI48_RS07700	0.74	+0.1
1,647,303	-		HGI48_RS07700	0.74	-0.4
1,647,343	+		HGI48_RS07700	0.76	-1.1
1,647,343	+		HGI48_RS07700	0.76	+0.1
1,647,343	+		HGI48_RS07700	0.76	-0.6
1,647,536	+		HGI48_RS07700	0.82	-1.9
1,647,536	+				+0.4
1,647,536	+		HGI48_RS07700	0.82	-1.2
1,647,537	-		HGI48_RS07700	0.82	-2.6
1,647,541	-		HGI48_RS07700	0.83	+0.0
1,647,637	+		HGI48_RS07700	0.86	-1.0
1,647,637	+		HGI48_RS07700	0.86	-2.2
1,647,638	-		HGI48_RS07700	0.86	-0.6
1,647,638	-		HGI48_RS07700	0.86	-0.3
1,647,649	+		HGI48_RS07700	0.87	-0.0
1,647,649	+		HGI48_RS07700	0.87	-0.5
1,647,649	+		HGI48_RS07700	0.87	-0.0
1,647,650	-		HGI48_RS07700	0.87	-0.3
1,647,863	-				+0.5
1,647,884	+				-0.2
1,647,884	+				-1.2
1,647,884	+				+1.1
1,647,884	+				+0.2
1,647,884	+				+1.8
1,648,041	-				-0.8
1,648,103	+				-0.2
1,648,104	-				+0.2
1,648,104	-				-0.4
1,648,104	-				+1.8
1,648,105	+				-0.5
1,648,105	+				+0.4
1,648,105	+				-1.2
1,648,105	+				-2.6
1,648,105	+				-1.9
1,648,105	+				+1.2
1,648,105	+				+0.1
1,648,106	-				+0.2
1,648,106	-				-0.3
1,648,106	-				-0.1
1,648,106	-				+1.2
1,648,106	-				+0.4
1,648,106	-				+2.7
1,648,108	+				+2.0
1,648,109	-				-0.8
1,648,109	-				+0.4
1,648,109	-				-1.6
1,648,109	-				-0.6
1,648,109	-				-2.9
1,648,109	-				+0.2
1,648,109	-				-0.6
1,648,109	-				-1.2
1,648,325	-		HGI48_RS07705	0.34	+0.1
1,648,340	-		HGI48_RS07705	0.36	-0.6
1,648,340	-		HGI48_RS07705	0.36	-1.3
1,648,343	+				+2.0
1,648,343	+				+2.6
1,648,344	-		HGI48_RS07705	0.37	-0.1
1,648,344	-		HGI48_RS07705	0.37	+0.1
1,648,344	-		HGI48_RS07705	0.37	+0.5
1,648,344	-		HGI48_RS07705	0.37	-2.2
1,648,344	-		HGI48_RS07705	0.37	+0.6
1,648,356	-				+0.4
1,648,408	+		HGI48_RS07705	0.46	+1.1
1,648,408	+		HGI48_RS07705	0.46	-0.4
1,648,408	+		HGI48_RS07705	0.46	+1.0
1,648,408	+		HGI48_RS07705	0.46	+0.5
1,648,409	-		HGI48_RS07705	0.46	-1.9
1,648,478	+		HGI48_RS07705	0.56	-0.3
1,648,479	-		HGI48_RS07705	0.56	-0.4
1,648,496	+		HGI48_RS07705	0.58	+0.0
1,648,496	+		HGI48_RS07705	0.58	+0.4
1,648,497	-		HGI48_RS07705	0.59	+0.7
1,648,497	-		HGI48_RS07705	0.59	+1.6
1,648,497	-		HGI48_RS07705	0.59	+1.4
1,648,497	-				+1.0
1,648,497	-		HGI48_RS07705	0.59	-1.4
1,648,499	+		HGI48_RS07705	0.59	-0.6
1,648,499	+		HGI48_RS07705	0.59	+0.6
1,648,500	-		HGI48_RS07705	0.59	-1.9
1,648,500	-		HGI48_RS07705	0.59	-0.4
1,648,548	-		HGI48_RS07705	0.66	-0.0
1,648,682	+		HGI48_RS07705	0.85	-0.1
1,648,683	-		HGI48_RS07705	0.85	-0.2
1,648,683	-		HGI48_RS07705	0.85	+0.1
1,648,683	-		HGI48_RS07705	0.85	-0.1
1,648,683	-		HGI48_RS07705	0.85	+0.1
1,648,697	+		HGI48_RS07705	0.87	+0.4
1,648,721	+				-0.3
1,648,784	+				+0.2
1,648,903	+		HGI48_RS07710	0.14	-1.2
1,648,904	-		HGI48_RS07710	0.14	-0.0
1,649,148	+				+2.0
1,649,148	+		HGI48_RS07710	0.40	+0.3
1,649,148	+		HGI48_RS07710	0.40	-0.6
1,649,149	-		HGI48_RS07710	0.40	-0.7
1,649,149	-		HGI48_RS07710	0.40	-1.1
1,649,149	-		HGI48_RS07710	0.40	-0.1
1,649,243	-		HGI48_RS07710	0.50	-0.6
1,649,655	-				+0.2
1,649,670	+				+1.2
1,649,670	+				+1.1
1,649,670	+				-0.2
1,649,671	-				+0.7
1,649,681	+				-1.0
1,649,691	+				+0.1
1,649,691	+				+0.1
1,649,692	-				+0.2
1,649,692	-				+0.9
1,649,706	+				-2.2
1,649,706	+				+0.5
1,649,707	-				-0.3
1,649,707	-				+0.1
1,649,707	-				+0.3
1,649,707	-				-0.4