Strain Fitness in Dickeya dianthicola 67-19 around HGI48_RS07545

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
1,607,948	+		HGI48_RS07540	0.40	-1.7
1,607,949	-		HGI48_RS07540	0.40	-1.3
1,607,949	-		HGI48_RS07540	0.40	-0.3
1,607,949	-		HGI48_RS07540	0.40	-1.1
1,608,023	+		HGI48_RS07540	0.46	+0.5
1,608,023	+		HGI48_RS07540	0.46	+0.1
1,608,024	-		HGI48_RS07540	0.47	-0.9
1,608,024	-		HGI48_RS07540	0.47	+0.4
1,608,024	-				+1.4
1,608,079	+				+0.4
1,608,079	+		HGI48_RS07540	0.51	-0.3
1,608,079	+		HGI48_RS07540	0.51	-2.2
1,608,080	-		HGI48_RS07540	0.51	+0.8
1,608,080	-		HGI48_RS07540	0.51	-0.8
1,608,146	+		HGI48_RS07540	0.56	-2.2
1,608,146	+		HGI48_RS07540	0.56	-0.2
1,608,211	+				-0.2
1,608,212	-		HGI48_RS07540	0.62	-0.2
1,608,295	+		HGI48_RS07540	0.68	-1.4
1,608,298	+		HGI48_RS07540	0.69	-0.0
1,608,298	+		HGI48_RS07540	0.69	-1.2
1,608,298	+		HGI48_RS07540	0.69	-1.4
1,608,299	-		HGI48_RS07540	0.69	-2.8
1,608,484	-		HGI48_RS07540	0.84	+0.8
1,608,574	+				-1.9
1,608,575	-				-0.4
1,608,575	-				+1.4
1,608,754	+				-0.7
1,608,755	-				+3.2
1,608,755	-				+0.8
1,608,808	-		HGI48_RS07545	0.11	-0.6
1,608,906	-		HGI48_RS07545	0.17	-1.4
1,608,906	-		HGI48_RS07545	0.17	-1.4
1,608,906	-		HGI48_RS07545	0.17	-1.6
1,609,274	+				-0.2
1,609,421	-		HGI48_RS07545	0.52	-0.2
1,609,421	-		HGI48_RS07545	0.52	-0.9
1,609,684	-		HGI48_RS07545	0.70	-0.8
1,609,791	-		HGI48_RS07545	0.78	+0.2
1,609,791	-		HGI48_RS07545	0.78	-0.9
1,609,791	-		HGI48_RS07545	0.78	-0.8
1,609,862	-		HGI48_RS07545	0.83	-0.2
1,609,862	-		HGI48_RS07545	0.83	-0.7
1,609,914	-				+0.4
1,610,146	+				+0.4
1,610,147	-				-0.5
1,610,147	-				+0.9
1,610,165	-				+0.7
1,610,278	-				+0.9
1,610,329	-				-0.4
1,610,341	+				+0.4
1,610,341	+				-0.6
1,610,341	+				-0.1
1,610,342	-				-0.2
1,610,342	-				+0.2
1,610,347	-				-0.2
1,610,590	+		HGI48_RS07550	0.21	+0.4
1,610,644	-		HGI48_RS07550	0.24	+0.1
1,610,644	-		HGI48_RS07550	0.24	-2.4
1,610,699	+		HGI48_RS07550	0.27	-0.2
1,610,700	-		HGI48_RS07550	0.27	+0.8
1,610,715	+		HGI48_RS07550	0.27	-0.6
1,610,716	-		HGI48_RS07550	0.28	+0.2
1,610,716	-				+0.4
1,610,716	-		HGI48_RS07550	0.28	-0.8
1,610,716	-		HGI48_RS07550	0.28	-0.0
1,610,727	+		HGI48_RS07550	0.28	+0.6
1,610,728	-		HGI48_RS07550	0.28	-0.6
1,610,728	-		HGI48_RS07550	0.28	+0.4
1,610,728	-		HGI48_RS07550	0.28	-0.2
1,610,759	+		HGI48_RS07550	0.30	-0.5
1,610,759	+		HGI48_RS07550	0.30	-0.1
1,610,760	-				-0.2
1,610,949	+		HGI48_RS07550	0.40	+0.2
1,610,949	+		HGI48_RS07550	0.40	+0.1
1,610,949	+		HGI48_RS07550	0.40	-2.2
1,610,960	-		HGI48_RS07550	0.41	+0.3
1,610,966	-		HGI48_RS07550	0.41	+0.9
1,611,036	+		HGI48_RS07550	0.45	-0.4