Strain Fitness in Dickeya dianthicola 67-19 around HGI48_RS06180

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
1,312,987	+				+0.2
1,313,003	-				+1.3
1,313,013	+				-0.1
1,313,013	+				-0.0
1,313,013	+				-2.0
1,313,013	+				+0.4
1,313,014	-				+0.3
1,313,014	-				+0.3
1,313,014	-				-1.6
1,313,017	+				+0.5
1,313,017	+				+2.5
1,313,017	+				-2.5
1,313,017	+				+1.3
1,313,017	+				-0.0
1,313,018	-				+1.8
1,313,018	-				-0.7
1,313,018	-				-0.3
1,313,070	+				-1.0
1,313,097	+				-0.7
1,313,097	+				-0.3
1,313,103	+				+0.2
1,313,173	+				+1.3
1,313,173	+		HGI48_RS06175	0.18	-0.0
1,313,174	-		HGI48_RS06175	0.18	-0.3
1,313,275	+				+2.5
1,313,285	-		HGI48_RS06175	0.32	-0.5
1,313,311	+		HGI48_RS06175	0.35	+1.4
1,313,311	+				+1.5
1,313,312	-		HGI48_RS06175	0.35	-1.3
1,313,312	-		HGI48_RS06175	0.35	-0.3
1,313,312	-		HGI48_RS06175	0.35	-0.7
1,313,314	+		HGI48_RS06175	0.36	-0.3
1,313,314	+		HGI48_RS06175	0.36	+1.3
1,313,314	+		HGI48_RS06175	0.36	-0.8
1,313,314	+		HGI48_RS06175	0.36	+0.5
1,313,314	+		HGI48_RS06175	0.36	-0.5
1,313,314	+		HGI48_RS06175	0.36	-0.6
1,313,315	-		HGI48_RS06175	0.36	-1.5
1,313,315	-		HGI48_RS06175	0.36	+0.9
1,313,315	-		HGI48_RS06175	0.36	-0.3
1,313,315	-		HGI48_RS06175	0.36	+0.4
1,313,315	-				+1.1
1,313,315	-		HGI48_RS06175	0.36	-0.7
1,313,354	+		HGI48_RS06175	0.41	-0.5
1,313,372	+		HGI48_RS06175	0.43	-1.2
1,313,372	+		HGI48_RS06175	0.43	+1.4
1,313,372	+		HGI48_RS06175	0.43	-2.0
1,313,372	+				-1.0
1,313,372	+				+1.3
1,313,373	-		HGI48_RS06175	0.43	-0.9
1,313,383	+		HGI48_RS06175	0.44	+0.9
1,313,475	-		HGI48_RS06175	0.56	+0.9
1,313,475	-				-1.0
1,313,621	+		HGI48_RS06175	0.75	-1.3
1,313,621	+		HGI48_RS06175	0.75	+0.8
1,313,665	+		HGI48_RS06175	0.80	-0.3
1,313,666	-		HGI48_RS06175	0.80	+0.1
1,313,725	-		HGI48_RS06175	0.88	+0.1
1,313,775	+				-0.3
1,313,775	+				-1.0
1,313,775	+				-0.5
1,313,776	-				+0.7
1,313,776	-				-2.6
1,313,776	-				-0.3
1,313,784	+				+0.2
1,313,785	-				+0.5
1,313,785	-				-0.1
1,313,800	+				-2.0
1,313,873	-				+0.6
1,313,880	+				-0.5
1,313,905	+				+0.3
1,313,906	-				-1.0
1,313,916	-				-0.2
1,313,931	-				+0.8
1,313,931	-				+0.1
1,313,966	+				-0.0
1,313,966	+				-1.5
1,313,966	+				-0.5
1,313,967	-				-1.5
1,313,967	-				+0.5
1,313,970	+				+0.2
1,313,970	+				+1.9
1,313,970	+				-0.5
1,313,970	+				+0.1
1,313,970	+				+1.4
1,313,970	+				-1.6
1,313,970	+				-0.8
1,313,970	+				-0.5
1,313,970	+				-0.0
1,313,970	+				+0.1
1,313,971	-				+0.5
1,313,971	-				+1.4
1,313,971	-				-0.0
1,313,971	-				+0.7
1,313,971	-				+0.1
1,313,971	-				-0.3
1,313,971	-				-0.5
1,313,971	-				+0.1
1,313,971	-				+1.1
1,313,971	-				+2.0
1,313,974	+				-0.5
1,313,974	+				+1.4
1,313,974	+				-0.8
1,313,974	+				-2.0
1,313,974	+				+0.4
1,313,974	+				+0.2
1,313,974	+				+0.9
1,313,974	+				-0.2
1,313,974	+				+1.1
1,313,974	+				-0.1
1,313,974	+				-0.5
1,313,974	+				-0.7
1,313,974	+				-0.6
1,313,974	+				-0.1
1,313,975	-				+0.1
1,313,975	-				-1.0
1,313,975	-				-1.8
1,313,975	-				+1.9
1,313,975	-				+1.0
1,313,975	-				-1.2
1,313,975	-				+0.5
1,313,975	-				+1.5
1,313,975	-				+0.5
1,313,975	-				+1.0
1,313,975	-				+0.2
1,313,975	-				+0.1
1,313,983	+				-0.5
1,313,990	-				+1.8
1,314,000	+		HGI48_RS06180	0.12	+0.3
1,314,000	+		HGI48_RS06180	0.12	-1.9
1,314,000	+		HGI48_RS06180	0.12	+0.9
1,314,000	+		HGI48_RS06180	0.12	-0.8
1,314,001	-		HGI48_RS06180	0.12	+0.2
1,314,001	-		HGI48_RS06180	0.12	+0.4
1,314,044	-		HGI48_RS06180	0.33	+0.5
1,314,044	-		HGI48_RS06180	0.33	-0.1
1,314,048	+		HGI48_RS06180	0.35	+0.5
1,314,048	+				-0.0
1,314,048	+		HGI48_RS06180	0.35	+0.2
1,314,048	+		HGI48_RS06180	0.35	+1.2
1,314,048	+				+1.5
1,314,049	-		HGI48_RS06180	0.35	-0.8
1,314,049	-		HGI48_RS06180	0.35	-0.2
1,314,052	+		HGI48_RS06180	0.37	-1.7
1,314,052	+		HGI48_RS06180	0.37	+2.0
1,314,052	+		HGI48_RS06180	0.37	-0.0
1,314,052	+		HGI48_RS06180	0.37	+0.5
1,314,052	+		HGI48_RS06180	0.37	-0.5
1,314,052	+				+2.1
1,314,053	-		HGI48_RS06180	0.37	-2.9
1,314,053	-		HGI48_RS06180	0.37	+0.7
1,314,176	-				+1.3
1,314,182	+				-0.7
1,314,183	-				-0.4
1,314,183	-				-0.0
1,314,272	+				-0.5