Strain Fitness in Dickeya dianthicola 67-19 around HGI48_RS05720

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
1,205,752	+				+0.4
1,205,752	+				-1.8
1,205,829	+				+0.8
1,205,829	+				+1.0
1,205,926	-				-1.4
1,205,926	-				-2.2
1,205,997	+		HGI48_RS05715	0.19	-1.4
1,206,010	+		HGI48_RS05715	0.21	+0.8
1,206,010	+		HGI48_RS05715	0.21	-1.5
1,206,040	-		HGI48_RS05715	0.25	-0.4
1,206,042	+		HGI48_RS05715	0.25	-2.0
1,206,043	-		HGI48_RS05715	0.25	-1.4
1,206,172	-		HGI48_RS05715	0.44	+1.2
1,206,221	+		HGI48_RS05715	0.51	+0.1
1,206,222	-		HGI48_RS05715	0.51	-0.7
1,206,234	+		HGI48_RS05715	0.53	+0.6
1,206,234	+		HGI48_RS05715	0.53	-1.0
1,206,235	-		HGI48_RS05715	0.53	+0.9
1,206,235	-		HGI48_RS05715	0.53	-0.7
1,206,284	-		HGI48_RS05715	0.60	+0.4
1,206,346	+		HGI48_RS05715	0.69	+0.6
1,206,460	-		HGI48_RS05715	0.85	-0.0
1,206,490	-				-1.0
1,206,616	+				-0.8
1,206,616	+				+1.0
1,206,616	+				-0.6
1,206,616	+				-2.0
1,206,617	-				-0.2
1,206,617	-				+0.5
1,206,634	-				+1.2
1,206,734	-				+0.3
1,206,771	+				-0.0
1,206,772	-				-1.7
1,206,772	-				-0.3
1,206,772	-				+0.6
1,206,772	-				+0.3
1,206,772	-				-1.0
1,206,772	-				-0.7
1,206,772	-				-0.6
1,206,772	-				+0.1
1,206,774	+				-0.7
1,206,774	+				-0.7
1,206,774	+				-0.1
1,206,774	+				+0.3
1,206,774	+				+1.2
1,206,775	-				+0.4
1,206,775	-				+0.5
1,206,775	-				-0.7
1,206,775	-				-0.3
1,206,889	+		HGI48_RS05720	0.19	+0.4
1,206,889	+		HGI48_RS05720	0.19	-0.4
1,207,083	+		HGI48_RS05720	0.37	+0.1
1,207,083	+		HGI48_RS05720	0.37	+0.5
1,207,084	-		HGI48_RS05720	0.38	-0.1
1,207,084	-		HGI48_RS05720	0.38	-0.1
1,207,084	-				+1.2
1,207,084	-		HGI48_RS05720	0.38	+0.0
1,207,084	-		HGI48_RS05720	0.38	+0.2
1,207,146	+		HGI48_RS05720	0.43	+0.2
1,207,147	-		HGI48_RS05720	0.43	+0.6
1,207,197	+		HGI48_RS05720	0.48	-1.0
1,207,197	+		HGI48_RS05720	0.48	-0.2
1,207,236	+		HGI48_RS05720	0.52	+0.2
1,207,236	+		HGI48_RS05720	0.52	+1.2
1,207,259	-		HGI48_RS05720	0.54	+0.4
1,207,291	-		HGI48_RS05720	0.57	+0.7
1,207,308	+		HGI48_RS05720	0.59	-1.4
1,207,308	+		HGI48_RS05720	0.59	-0.7
1,207,309	-		HGI48_RS05720	0.59	-0.4
1,207,309	-		HGI48_RS05720	0.59	+1.0
1,207,319	+		HGI48_RS05720	0.60	+0.7
1,207,350	+		HGI48_RS05720	0.63	-1.4
1,207,351	-		HGI48_RS05720	0.63	+0.6
1,207,392	+		HGI48_RS05720	0.67	-0.6
1,207,427	-				+1.0
1,207,447	+		HGI48_RS05720	0.72	+0.3
1,207,476	+		HGI48_RS05720	0.75	+1.4
1,207,476	+		HGI48_RS05720	0.75	-0.4
1,207,633	-		HGI48_RS05720	0.90	-2.0
1,207,633	-		HGI48_RS05720	0.90	-0.9
1,207,633	-		HGI48_RS05720	0.90	+0.4
1,207,762	-				-0.8
1,207,768	+				+0.9
1,207,768	+				-0.7
1,207,768	+				+0.6
1,207,768	+				-0.8
1,207,768	+				-1.6
1,207,768	+				+1.3
1,207,769	-				+0.6
1,207,769	-				-0.8
1,207,769	-				-0.3
1,207,769	-				-2.0
1,207,769	-				-0.4
1,207,769	-				-0.6
1,207,769	-				-0.8
1,207,876	+				+1.4
1,207,911	-				-0.2
1,207,913	-				+0.7
1,207,919	-				+1.0
1,207,939	+				-0.2
1,207,940	-				+0.7
1,207,940	-				+0.7
1,207,957	-				+0.5
1,207,970	-		HGI48_RS05725	0.11	+0.6
1,208,057	+		HGI48_RS05725	0.30	-0.0
1,208,057	+		HGI48_RS05725	0.30	-0.2
1,208,057	+		HGI48_RS05725	0.30	-0.2
1,208,057	+		HGI48_RS05725	0.30	-0.1
1,208,057	+		HGI48_RS05725	0.30	-0.8
1,208,058	-		HGI48_RS05725	0.30	+2.2
1,208,186	-		HGI48_RS05725	0.58	+0.1
1,208,231	+		HGI48_RS05725	0.68	+0.9
1,208,232	-		HGI48_RS05725	0.68	-0.2
1,208,235	+		HGI48_RS05725	0.68	-0.4
1,208,235	+		HGI48_RS05725	0.68	+0.8
1,208,236	-		HGI48_RS05725	0.69	-0.8
1,208,268	-		HGI48_RS05725	0.76	-0.6
1,208,268	-		HGI48_RS05725	0.76	+0.6
1,208,279	+				+2.4
1,208,320	+		HGI48_RS05725	0.87	+0.2
1,208,320	+		HGI48_RS05725	0.87	+0.2
1,208,320	+		HGI48_RS05725	0.87	-1.0
1,208,320	+		HGI48_RS05725	0.87	-0.1
1,208,321	-		HGI48_RS05725	0.87	+0.2
1,208,321	-		HGI48_RS05725	0.87	+0.2
1,208,321	-		HGI48_RS05725	0.87	-0.3
1,208,321	-		HGI48_RS05725	0.87	+0.7
1,208,336	-				-0.8
1,208,376	+				-0.2
1,208,376	+				-1.0
1,208,378	+				+1.6
1,208,386	-				+0.9
1,208,395	-				+0.1
1,208,395	-				-1.0
1,208,395	-				+0.6
1,208,395	-				+1.0
1,208,395	-				+0.2
1,208,395	-				-0.2
1,208,401	+				-0.5
1,208,402	-				-0.7
1,208,402	-				+0.2
1,208,402	-				+0.1
1,208,402	-				+1.0
1,208,402	-				-0.6
1,208,402	-				-0.4
1,208,405	+				+0.6
1,208,405	+				-2.4
1,208,405	+				-1.1
1,208,408	-				+0.4
1,208,410	+				-1.0
1,208,411	-				+0.6
1,208,411	-				-0.4
1,208,420	-				+0.9
1,208,429	+				+0.6
1,208,477	+				+1.0
1,208,478	-				-1.3
1,208,485	+				-0.1
1,208,620	-				-0.2
1,208,660	+		HGI48_RS05730	0.11	-0.4
1,208,668	+		HGI48_RS05730	0.12	-0.9
1,208,668	+		HGI48_RS05730	0.12	-0.2
1,208,669	-		HGI48_RS05730	0.12	+1.2
1,208,669	-		HGI48_RS05730	0.12	-2.8
1,208,714	-		HGI48_RS05730	0.14	+0.4