Strain Fitness in Dickeya dianthicola 67-19 around HGI48_RS05710

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
1,204,490	+		HGI48_RS05705	0.60	+0.2
1,204,490	+				-1.0
1,204,491	-		HGI48_RS05705	0.60	-0.3
1,204,491	-		HGI48_RS05705	0.60	-0.2
1,204,519	+		HGI48_RS05705	0.62	+0.6
1,204,719	+				+2.2
1,204,719	+		HGI48_RS05705	0.72	-0.8
1,204,720	-		HGI48_RS05705	0.72	+0.9
1,204,720	-		HGI48_RS05705	0.72	+0.1
1,204,720	-		HGI48_RS05705	0.72	-0.4
1,204,720	-		HGI48_RS05705	0.72	+0.3
1,204,897	+				+1.9
1,204,898	-		HGI48_RS05705	0.82	-1.3
1,205,070	-				-0.3
1,205,212	+				+1.3
1,205,239	+				-0.0
1,205,240	-				-0.1
1,205,406	-				+0.6
1,205,406	-				-1.8
1,205,481	+		HGI48_RS05710	0.27	+0.8
1,205,571	+				+1.3
1,205,571	+		HGI48_RS05710	0.51	-1.8
1,205,572	-		HGI48_RS05710	0.51	+0.5
1,205,574	+		HGI48_RS05710	0.52	-0.1
1,205,575	-		HGI48_RS05710	0.52	+0.5
1,205,575	-		HGI48_RS05710	0.52	-0.0
1,205,575	-		HGI48_RS05710	0.52	-2.0
1,205,752	+				+0.4
1,205,752	+				-1.8
1,205,829	+				+0.8
1,205,829	+				+1.0
1,205,926	-				-1.4
1,205,926	-				-2.2
1,205,997	+		HGI48_RS05715	0.19	-1.4
1,206,010	+		HGI48_RS05715	0.21	+0.8
1,206,010	+		HGI48_RS05715	0.21	-1.5
1,206,040	-		HGI48_RS05715	0.25	-0.4
1,206,042	+		HGI48_RS05715	0.25	-2.0
1,206,043	-		HGI48_RS05715	0.25	-1.4
1,206,172	-		HGI48_RS05715	0.44	+1.2
1,206,221	+		HGI48_RS05715	0.51	+0.1
1,206,222	-		HGI48_RS05715	0.51	-0.7
1,206,234	+		HGI48_RS05715	0.53	+0.6
1,206,234	+		HGI48_RS05715	0.53	-1.0
1,206,235	-		HGI48_RS05715	0.53	+0.9
1,206,235	-		HGI48_RS05715	0.53	-0.7
1,206,284	-		HGI48_RS05715	0.60	+0.4
1,206,346	+		HGI48_RS05715	0.69	+0.6
1,206,460	-		HGI48_RS05715	0.85	-0.0
1,206,490	-				-1.0
1,206,616	+				-0.8
1,206,616	+				+1.0
1,206,616	+				-0.6
1,206,616	+				-2.0
1,206,617	-				-0.2
1,206,617	-				+0.5
1,206,634	-				+1.2
1,206,734	-				+0.3