Strain Fitness in Dickeya dianthicola 67-19 around HGI48_RS05090

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
1,065,425	+		HGI48_RS05080	0.50	+0.3
1,065,426	-		HGI48_RS05080	0.50	-1.1
1,065,438	+		HGI48_RS05080	0.54	-0.7
1,065,439	-		HGI48_RS05080	0.54	+0.1
1,065,439	-		HGI48_RS05080	0.54	-0.1
1,065,439	-		HGI48_RS05080	0.54	+0.2
1,065,497	-		HGI48_RS05080	0.72	+0.1
1,065,497	-		HGI48_RS05080	0.72	-0.7
1,065,497	-		HGI48_RS05080	0.72	+0.1
1,065,727	+		HGI48_RS05085	0.18	+0.6
1,065,727	+		HGI48_RS05085	0.18	+0.4
1,065,728	-		HGI48_RS05085	0.18	-0.7
1,065,728	-		HGI48_RS05085	0.18	-0.8
1,065,728	-		HGI48_RS05085	0.18	-0.6
1,065,728	-		HGI48_RS05085	0.18	+0.7
1,065,728	-				+2.4
1,065,728	-		HGI48_RS05085	0.18	+0.3
1,065,728	-		HGI48_RS05085	0.18	+1.2
1,065,728	-		HGI48_RS05085	0.18	+0.3
1,065,728	-		HGI48_RS05085	0.18	+0.9
1,065,731	+		HGI48_RS05085	0.18	-1.7
1,065,732	-		HGI48_RS05085	0.18	+0.6
1,065,736	+		HGI48_RS05085	0.19	-0.8
1,065,737	-		HGI48_RS05085	0.19	+0.7
1,065,737	-		HGI48_RS05085	0.19	+0.2
1,065,737	-		HGI48_RS05085	0.19	-0.3
1,065,891	+		HGI48_RS05085	0.39	-0.6
1,065,891	+		HGI48_RS05085	0.39	-0.1
1,065,891	+		HGI48_RS05085	0.39	+1.1
1,065,891	+		HGI48_RS05085	0.39	+0.2
1,065,891	+		HGI48_RS05085	0.39	-1.0
1,065,891	+		HGI48_RS05085	0.39	-2.3
1,065,891	+				-0.0
1,065,892	-		HGI48_RS05085	0.39	-0.7
1,065,892	-		HGI48_RS05085	0.39	-1.0
1,065,892	-		HGI48_RS05085	0.39	-1.2
1,065,927	-		HGI48_RS05085	0.43	-1.9
1,065,930	+		HGI48_RS05085	0.44	-0.2
1,066,088	+		HGI48_RS05085	0.64	+0.6
1,066,088	+		HGI48_RS05085	0.64	-2.2
1,066,088	+		HGI48_RS05085	0.64	+1.0
1,066,088	+				+0.6
1,066,088	+		HGI48_RS05085	0.64	-0.6
1,066,089	-		HGI48_RS05085	0.64	+1.6
1,066,089	-		HGI48_RS05085	0.64	+0.9
1,066,089	-		HGI48_RS05085	0.64	-1.2
1,066,276	+				+1.6
1,066,276	+		HGI48_RS05085	0.88	-0.1
1,066,276	+		HGI48_RS05085	0.88	-0.6
1,066,277	-		HGI48_RS05085	0.88	+0.7
1,066,277	-				-0.0
1,066,277	-		HGI48_RS05085	0.88	-1.7
1,066,277	-		HGI48_RS05085	0.88	+0.2
1,066,371	+				+0.6
1,066,371	+				+1.4
1,066,372	-				-0.6
1,066,372	-				+0.4
1,066,407	-				+0.8
1,066,489	+		HGI48_RS05090	0.21	-1.2
1,066,513	+		HGI48_RS05090	0.27	-0.7
1,066,513	+		HGI48_RS05090	0.27	-0.3
1,066,513	+		HGI48_RS05090	0.27	-0.2
1,066,531	-		HGI48_RS05090	0.31	-0.7
1,066,531	-		HGI48_RS05090	0.31	-0.1
1,066,593	-		HGI48_RS05090	0.44	-1.0
1,066,605	+		HGI48_RS05090	0.47	+1.2
1,066,605	+		HGI48_RS05090	0.47	-3.4
1,066,606	-		HGI48_RS05090	0.47	-1.2
1,066,606	-		HGI48_RS05090	0.47	-0.2
1,066,606	-		HGI48_RS05090	0.47	-0.5
1,066,645	+		HGI48_RS05090	0.56	+0.2
1,066,645	+		HGI48_RS05090	0.56	-2.6
1,066,645	+		HGI48_RS05090	0.56	-1.4
1,066,645	+		HGI48_RS05090	0.56	-0.4
1,066,650	+		HGI48_RS05090	0.57	-2.9
1,066,680	+		HGI48_RS05090	0.64	-0.3
1,066,680	+		HGI48_RS05090	0.64	-1.7
1,066,680	+				-1.0
1,066,680	+		HGI48_RS05090	0.64	-1.0
1,066,681	-		HGI48_RS05090	0.64	-2.0
1,066,686	-				+0.6
1,066,686	-		HGI48_RS05090	0.65	-1.0
1,066,839	-				+0.8
1,066,839	-				-1.0
1,066,839	-				+1.9
1,066,842	+				-0.8
1,066,842	+				+0.6
1,066,843	-				+0.2
1,066,843	-				-0.1
1,066,843	-				+0.2
1,066,843	-				-0.8
1,066,843	-				-0.7
1,066,847	-				+1.0
1,066,856	-				-0.4
1,066,870	+				+1.6
1,066,870	+				-0.1
1,066,870	+				-1.1
1,066,870	+				-0.2
1,066,870	+				-0.3
1,066,870	+				-0.4
1,066,870	+				-2.7
1,066,870	+				-0.1
1,066,870	+				-1.2
1,066,871	-				+0.6
1,066,871	-				+0.6
1,066,871	-				+1.6
1,066,871	-				-2.7
1,066,871	-				-0.3
1,066,939	+				+0.8
1,066,940	-				-0.2
1,066,940	-				+1.4
1,066,940	-				+0.6
1,066,940	-				-0.3
1,066,947	-				-0.7
1,066,947	-				-0.9
1,066,975	+				+1.0
1,066,975	+				+0.3
1,066,976	-				+0.2
1,066,976	-				-0.2
1,066,976	-				+0.8
1,067,171	+				-1.0
1,067,171	+		HGI48_RS05095	0.40	-0.1
1,067,172	-		HGI48_RS05095	0.40	-0.3
1,067,172	-		HGI48_RS05095	0.40	-0.2
1,067,172	-		HGI48_RS05095	0.40	-0.2
1,067,207	+		HGI48_RS05095	0.49	+0.3
1,067,255	+				+0.6
1,067,256	-				+1.6
1,067,359	-		HGI48_RS05095	0.88	+0.2
1,067,399	+				-2.6
1,067,399	+				-0.7
1,067,399	+				-0.4
1,067,399	+				-1.0
1,067,400	-				+0.7
1,067,400	-				-0.7
1,067,400	-				+1.2
1,067,403	+				-2.7
1,067,403	+				-1.3
1,067,403	+				-0.8
1,067,403	+				-0.8
1,067,403	+				+0.7
1,067,403	+				-0.4
1,067,403	+				-0.0
1,067,404	-				+2.2
1,067,404	-				+0.6
1,067,404	-				-0.4
1,067,404	-				-0.5
1,067,404	-				-0.4
1,067,404	-				+1.2
1,067,404	-				+0.2
1,067,404	-				-1.0
1,067,404	-				-0.8
1,067,404	-				+1.6
1,067,513	-				-0.3
1,067,513	-				-2.4
1,067,532	+				+0.4
1,067,545	+				+0.6
1,067,545	+				+0.6
1,067,546	-				-0.0
1,067,546	-				-0.4
1,067,546	-				-0.8
1,067,546	-				+0.3
1,067,548	+				-2.4
1,067,549	-				+2.2