Strain Fitness in Dickeya dianthicola 67-19 around HGI48_RS04925

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
1,030,609	+		HGI48_RS04915	0.38	-0.7
1,030,610	-		HGI48_RS04915	0.39	+0.3
1,030,785	-				+0.0
1,030,787	+		HGI48_RS04915	0.63	+0.1
1,030,788	-		HGI48_RS04915	0.63	-0.1
1,030,788	-				+0.6
1,030,892	+		HGI48_RS04915	0.78	-1.0
1,030,892	+		HGI48_RS04915	0.78	+0.3
1,030,892	+		HGI48_RS04915	0.78	+1.4
1,030,892	+		HGI48_RS04915	0.78	-0.3
1,030,893	-				+0.6
1,030,893	-		HGI48_RS04915	0.78	-2.0
1,030,893	-		HGI48_RS04915	0.78	-0.6
1,030,893	-				+0.0
1,030,893	-		HGI48_RS04915	0.78	+0.6
1,030,950	+		HGI48_RS04915	0.86	+1.4
1,030,951	-		HGI48_RS04915	0.86	-0.4
1,030,951	-		HGI48_RS04915	0.86	+0.2
1,030,951	-		HGI48_RS04915	0.86	+0.2
1,031,049	+				-2.7
1,031,050	-				+0.5
1,031,050	-				+0.2
1,031,056	+				+0.6
1,031,076	+				-0.1
1,031,234	+		HGI48_RS04920	0.53	+0.9
1,031,238	+		HGI48_RS04920	0.54	+0.3
1,031,238	+		HGI48_RS04920	0.54	-0.2
1,031,238	+				+1.6
1,031,238	+		HGI48_RS04920	0.54	+0.1
1,031,239	-		HGI48_RS04920	0.54	+0.2
1,031,239	-		HGI48_RS04920	0.54	+0.6
1,031,239	-		HGI48_RS04920	0.54	-1.5
1,031,239	-		HGI48_RS04920	0.54	-1.7
1,031,239	-		HGI48_RS04920	0.54	+0.1
1,031,308	+		HGI48_RS04920	0.74	-1.5
1,031,308	+		HGI48_RS04920	0.74	+0.9
1,031,308	+		HGI48_RS04920	0.74	-0.7
1,031,308	+		HGI48_RS04920	0.74	-1.0
1,031,309	-		HGI48_RS04920	0.75	-1.0
1,031,309	-		HGI48_RS04920	0.75	-2.6
1,031,309	-		HGI48_RS04920	0.75	-0.2
1,031,363	-				+0.4
1,031,507	+				-0.4
1,031,507	+				+0.9
1,031,507	+				+0.1
1,031,507	+				-1.7
1,031,517	-				+0.0
1,031,543	-				-1.1
1,031,568	+				-0.6
1,031,568	+				-1.6
1,031,671	+		HGI48_RS04925	0.23	-0.6
1,031,671	+		HGI48_RS04925	0.23	-1.0
1,031,671	+		HGI48_RS04925	0.23	+1.3
1,031,671	+		HGI48_RS04925	0.23	+0.3
1,031,671	+		HGI48_RS04925	0.23	+0.7
1,031,671	+		HGI48_RS04925	0.23	+0.5
1,031,671	+		HGI48_RS04925	0.23	-1.4
1,031,672	-		HGI48_RS04925	0.23	-0.4
1,031,672	-		HGI48_RS04925	0.23	-0.2
1,031,672	-		HGI48_RS04925	0.23	+0.9
1,031,846	+		HGI48_RS04925	0.47	-0.1
1,031,846	+		HGI48_RS04925	0.47	+1.0
1,031,846	+		HGI48_RS04925	0.47	+0.3
1,031,847	-				+1.0
1,031,847	-		HGI48_RS04925	0.47	+1.9
1,031,884	+		HGI48_RS04925	0.52	-0.4
1,032,163	+				-0.2
1,032,163	+				-0.5
1,032,163	+				-0.4
1,032,163	+				-1.2
1,032,163	+				-0.4
1,032,163	+				-0.9
1,032,163	+				+1.2
1,032,163	+				+0.0
1,032,163	+				-0.2
1,032,163	+				-0.6
1,032,164	-				+0.0
1,032,164	-				-1.7
1,032,164	-				+0.0
1,032,164	-				-0.2
1,032,164	-				-1.0
1,032,164	-				-1.1
1,032,164	-				-0.1
1,032,164	-				-0.8
1,032,164	-				+0.6
1,032,164	-				-1.3
1,032,164	-				-1.0
1,032,164	-				-1.4
1,032,164	-				+1.6
1,032,164	-				+0.6
1,032,164	-				+0.2
1,032,164	-				-0.7
1,032,167	+				+0.6
1,032,167	+				+0.6
1,032,232	+				+0.0
1,032,238	-				-1.0
1,032,252	+				-1.2
1,032,290	-				-0.4
1,032,421	-				-1.0
1,032,422	+				+2.2
1,032,519	+				+0.6
1,032,519	+				+1.6
1,032,520	-				-0.2
1,032,520	-				-0.5
1,032,520	-				+2.2
1,032,520	-				-0.1
1,032,527	+				-0.6
1,032,527	+				+0.4
1,032,528	-				+0.6
1,032,528	-				+0.0
1,032,555	+				-0.1
1,032,556	-				-1.7
1,032,556	-				-1.2
1,032,570	-				-1.4
1,032,570	-				-2.0
1,032,570	-				+0.0
1,032,570	-				-0.4
1,032,570	-				+0.6
1,032,580	+				+0.2
1,032,580	+				-0.1
1,032,727	-				+0.6
1,032,742	-				+0.6
1,032,744	+				+1.8
1,032,745	-				+0.0
1,032,908	+				+0.6
1,032,909	-				+0.3
1,032,911	+				+0.0
1,032,912	-				-0.5
1,032,958	+				+0.3
1,032,959	-				+0.3
1,032,959	-				+1.0
1,032,960	+				+0.6
1,032,960	+				+0.3
1,032,960	+				+0.2
1,032,961	-				+0.3
1,032,961	-				+1.1
1,032,961	-				-0.6
1,032,961	-				-1.0
1,032,987	+				+0.4
1,032,988	-				+0.4
1,033,006	+				+0.0
1,033,078	-		HGI48_RS04930	0.11	-0.5
1,033,210	+		HGI48_RS04930	0.15	+0.6
1,033,211	-		HGI48_RS04930	0.15	-0.0
1,033,211	-		HGI48_RS04930	0.15	-0.7
1,033,211	-		HGI48_RS04930	0.15	-1.4
1,033,212	+		HGI48_RS04930	0.15	+0.6
1,033,213	-		HGI48_RS04930	0.15	-2.6
1,033,213	-		HGI48_RS04930	0.15	-0.4