Strain Fitness in Dickeya dianthicola 67-19 around HGI48_RS04910

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
1,028,761	+				-1.0
1,028,815	-				-0.2
1,028,815	-				-0.4
1,028,815	-				+0.6
1,028,843	-		HGI48_RS04905	0.11	+0.6
1,028,873	+		HGI48_RS04905	0.22	+0.4
1,028,873	+		HGI48_RS04905	0.22	+0.0
1,028,874	-		HGI48_RS04905	0.22	+0.2
1,028,874	-		HGI48_RS04905	0.22	-0.4
1,028,874	-		HGI48_RS04905	0.22	-1.7
1,028,874	-				+0.0
1,028,874	-		HGI48_RS04905	0.22	-0.3
1,028,874	-		HGI48_RS04905	0.22	+0.6
1,028,896	+		HGI48_RS04905	0.30	+0.0
1,028,897	-		HGI48_RS04905	0.31	-0.4
1,028,897	-		HGI48_RS04905	0.31	-0.5
1,028,938	+		HGI48_RS04905	0.46	+0.2
1,028,939	-		HGI48_RS04905	0.46	-0.7
1,028,994	+		HGI48_RS04905	0.66	-0.4
1,028,994	+		HGI48_RS04905	0.66	+1.8
1,028,995	-		HGI48_RS04905	0.67	-0.8
1,028,995	-				-1.0
1,028,995	-		HGI48_RS04905	0.67	-1.6
1,028,995	-		HGI48_RS04905	0.67	+1.6
1,028,995	-		HGI48_RS04905	0.67	-1.1
1,028,995	-		HGI48_RS04905	0.67	+1.4
1,028,995	-		HGI48_RS04905	0.67	-1.4
1,029,057	-		HGI48_RS04905	0.89	+0.9
1,029,089	+				+0.3
1,029,089	+				-0.6
1,029,089	+				-1.0
1,029,090	-				-1.0
1,029,090	-				+1.6
1,029,090	-				+0.6
1,029,090	-				-1.0
1,029,090	-				+0.4
1,029,090	-				+1.4
1,029,148	+				-1.4
1,029,201	+		HGI48_RS04910	0.10	-1.1
1,029,201	+		HGI48_RS04910	0.10	-0.7
1,029,201	+		HGI48_RS04910	0.10	+0.4
1,029,201	+		HGI48_RS04910	0.10	-0.5
1,029,202	-		HGI48_RS04910	0.10	-1.0
1,029,202	-		HGI48_RS04910	0.10	-1.7
1,029,202	-		HGI48_RS04910	0.10	-2.2
1,029,202	-		HGI48_RS04910	0.10	+0.3
1,029,202	-		HGI48_RS04910	0.10	-1.4
1,029,203	+		HGI48_RS04910	0.11	+0.9
1,029,204	-		HGI48_RS04910	0.11	-0.2
1,029,204	-		HGI48_RS04910	0.11	-2.0
1,029,396	-		HGI48_RS04910	0.28	+0.2
1,029,396	-		HGI48_RS04910	0.28	+0.7
1,029,515	+		HGI48_RS04910	0.39	-1.0
1,029,539	+		HGI48_RS04910	0.42	-3.1
1,029,840	+		HGI48_RS04910	0.69	+0.6
1,029,926	+		HGI48_RS04910	0.77	-0.7
1,030,005	+		HGI48_RS04910	0.84	-1.4
1,030,019	+		HGI48_RS04910	0.86	+0.1
1,030,020	-		HGI48_RS04910	0.86	-1.3
1,030,077	+				+0.6
1,030,078	-				+0.7
1,030,079	+				+0.2
1,030,079	+				+0.6
1,030,079	+				+0.3
1,030,079	+				-0.3
1,030,079	+				-0.1
1,030,080	-				-0.4
1,030,080	-				-0.4
1,030,113	+				-0.4
1,030,173	+				-2.0
1,030,232	+				-1.8
1,030,232	+				+0.9
1,030,232	+				-0.1
1,030,233	-				-0.9
1,030,233	-				+0.2
1,030,233	-				-0.3
1,030,233	-				-1.7
1,030,233	-				-0.7
1,030,238	-				+1.2
1,030,269	+				+0.6
1,030,269	+				+0.8
1,030,331	+				-0.5
1,030,331	+				-0.4
1,030,331	+				-2.2
1,030,385	+				+0.6
1,030,386	-				+0.6
1,030,609	+		HGI48_RS04915	0.38	-0.7
1,030,610	-		HGI48_RS04915	0.39	+0.3
1,030,785	-				+0.0
1,030,787	+		HGI48_RS04915	0.63	+0.1
1,030,788	-		HGI48_RS04915	0.63	-0.1
1,030,788	-				+0.6
1,030,892	+		HGI48_RS04915	0.78	-1.0
1,030,892	+		HGI48_RS04915	0.78	+0.3
1,030,892	+		HGI48_RS04915	0.78	+1.4
1,030,892	+		HGI48_RS04915	0.78	-0.3
1,030,893	-				+0.6
1,030,893	-		HGI48_RS04915	0.78	-2.0
1,030,893	-		HGI48_RS04915	0.78	-0.6
1,030,893	-				+0.0
1,030,893	-		HGI48_RS04915	0.78	+0.6
1,030,950	+		HGI48_RS04915	0.86	+1.4
1,030,951	-		HGI48_RS04915	0.86	-0.4
1,030,951	-		HGI48_RS04915	0.86	+0.2
1,030,951	-		HGI48_RS04915	0.86	+0.2
1,031,049	+				-2.7
1,031,050	-				+0.5
1,031,050	-				+0.2
1,031,056	+				+0.6
1,031,076	+				-0.1