Strain Fitness in Dickeya dianthicola 67-19 around HGI48_RS04800

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
1,006,913	+				-0.3
1,006,937	-				+0.6
1,006,970	-				+1.0
1,007,180	-				-0.4
1,007,183	-				-1.0
1,007,257	-		HGI48_RS04795	0.19	+0.6
1,007,257	-		HGI48_RS04795	0.19	-0.1
1,007,257	-		HGI48_RS04795	0.19	+1.1
1,007,730	-		HGI48_RS04795	0.82	+1.0
1,007,837	-				-1.7
1,007,848	+				-0.7
1,007,923	+				-1.3
1,007,924	-				-0.7
1,007,927	+				-1.5
1,007,951	+				-0.3
1,008,111	-		HGI48_RS04800	0.21	-0.4
1,008,185	+		HGI48_RS04800	0.27	-1.9
1,008,234	-		HGI48_RS04800	0.31	-1.4
1,008,284	+		HGI48_RS04800	0.35	-1.0
1,008,305	-		HGI48_RS04800	0.37	-0.1
1,008,323	-		HGI48_RS04800	0.38	-2.0
1,008,323	-		HGI48_RS04800	0.38	-1.7
1,008,387	+		HGI48_RS04800	0.44	+0.0
1,008,639	-				+2.2
1,008,710	-				+0.6
1,008,792	-		HGI48_RS04800	0.77	-1.7
1,008,793	+		HGI48_RS04800	0.77	-0.1
1,008,794	-		HGI48_RS04800	0.77	-1.0
1,008,862	+		HGI48_RS04800	0.83	+1.4
1,009,167	+				+0.1
1,009,190	+				-1.0
1,009,190	+				+3.6
1,009,190	+				-0.0
1,009,190	+				+0.3
1,009,190	+				+1.1
1,009,191	-				+0.6
1,009,191	-				+1.9
1,009,191	-				-1.0
1,009,191	-				+0.2
1,009,379	+		HGI48_RS04805	0.33	-0.4
1,009,382	+				+0.0
1,009,383	-		HGI48_RS04805	0.34	-0.1
1,009,383	-				+0.0
1,009,383	-				-0.4
1,009,428	+		HGI48_RS04805	0.42	+0.1
1,009,428	+				+1.6
1,009,441	-		HGI48_RS04805	0.44	-0.1
1,009,441	-		HGI48_RS04805	0.44	-0.6
1,009,441	-		HGI48_RS04805	0.44	+0.3
1,009,441	-		HGI48_RS04805	0.44	+0.4
1,009,441	-		HGI48_RS04805	0.44	-0.5
1,009,441	-				+0.6
1,009,535	-		HGI48_RS04805	0.61	-2.6
1,009,535	-		HGI48_RS04805	0.61	-0.1
1,009,535	-		HGI48_RS04805	0.61	-0.7
1,009,565	+		HGI48_RS04805	0.66	-1.7
1,009,565	+		HGI48_RS04805	0.66	+0.0
1,009,565	+				+1.0
1,009,566	-				+2.2
1,009,566	-		HGI48_RS04805	0.66	+1.2
1,009,612	-		HGI48_RS04805	0.74	-0.4
1,009,629	-		HGI48_RS04805	0.77	+1.0
1,009,664	-		HGI48_RS04805	0.83	+0.5
1,009,687	-		HGI48_RS04805	0.87	-0.5
1,009,687	-		HGI48_RS04805	0.87	-1.4
1,009,695	+				+0.6
1,009,695	+		HGI48_RS04805	0.89	+0.1
1,009,696	-		HGI48_RS04805	0.89	-1.4
1,009,696	-		HGI48_RS04805	0.89	+0.3
1,009,735	+				-0.7
1,009,757	+				+0.9
1,009,758	-				+0.0
1,009,758	-				-1.6
1,009,771	+				-0.7
1,009,816	-				-0.2
1,009,821	-				+0.3
1,009,992	+		HGI48_RS04810	0.29	+1.1