Experiment: LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HGI48_RS03310 and HGI48_RS03315 are separated by 62 nucleotides HGI48_RS03315 and HGI48_RS03320 are separated by 89 nucleotides
HGI48_RS03310: HGI48_RS03310 - deoxyribose-phosphate aldolase, at 698,175 to 698,954
_RS03310
HGI48_RS03315: HGI48_RS03315 - thymidine phosphorylase, at 699,017 to 700,348
_RS03315
HGI48_RS03320: HGI48_RS03320 - phosphopentomutase, at 700,438 to 701,661
_RS03320
Position (kb) 699
700
701 Strain fitness (log2 ratio) -2
-1
0
1 at 698.039 kb on - strand at 698.058 kb on + strand at 698.059 kb on - strand at 698.059 kb on - strand at 698.066 kb on + strand at 698.080 kb on + strand at 698.108 kb on + strand at 698.109 kb on - strand at 698.109 kb on - strand at 698.109 kb on - strand at 698.124 kb on + strand at 698.125 kb on - strand at 698.130 kb on + strand at 698.130 kb on + strand at 698.131 kb on - strand at 698.174 kb on + strand at 698.175 kb on - strand at 698.175 kb on - strand at 698.175 kb on - strand at 698.186 kb on - strand at 698.225 kb on - strand at 698.225 kb on - strand at 698.283 kb on - strand, within HGI48_RS03310 at 698.315 kb on + strand, within HGI48_RS03310 at 698.315 kb on + strand, within HGI48_RS03310 at 698.316 kb on - strand, within HGI48_RS03310 at 698.316 kb on - strand, within HGI48_RS03310 at 698.316 kb on - strand, within HGI48_RS03310 at 698.316 kb on - strand, within HGI48_RS03310 at 698.319 kb on + strand, within HGI48_RS03310 at 698.319 kb on + strand, within HGI48_RS03310 at 698.319 kb on + strand, within HGI48_RS03310 at 698.576 kb on - strand, within HGI48_RS03310 at 698.775 kb on - strand, within HGI48_RS03310 at 698.792 kb on - strand at 698.817 kb on + strand, within HGI48_RS03310 at 698.818 kb on - strand, within HGI48_RS03310 at 698.838 kb on - strand, within HGI48_RS03310 at 698.838 kb on - strand, within HGI48_RS03310 at 698.993 kb on - strand at 698.999 kb on + strand at 698.999 kb on + strand at 698.999 kb on + strand at 698.999 kb on + strand at 699.000 kb on - strand at 699.166 kb on + strand, within HGI48_RS03315 at 699.166 kb on + strand, within HGI48_RS03315 at 699.167 kb on - strand, within HGI48_RS03315 at 699.338 kb on + strand, within HGI48_RS03315 at 699.339 kb on - strand, within HGI48_RS03315 at 699.339 kb on - strand, within HGI48_RS03315 at 699.452 kb on - strand, within HGI48_RS03315 at 699.518 kb on + strand, within HGI48_RS03315 at 699.656 kb on + strand, within HGI48_RS03315 at 699.656 kb on + strand, within HGI48_RS03315 at 699.656 kb on + strand, within HGI48_RS03315 at 699.656 kb on + strand, within HGI48_RS03315 at 699.657 kb on - strand, within HGI48_RS03315 at 699.657 kb on - strand, within HGI48_RS03315 at 699.657 kb on - strand, within HGI48_RS03315 at 699.657 kb on - strand, within HGI48_RS03315 at 699.783 kb on + strand at 699.951 kb on + strand, within HGI48_RS03315 at 699.951 kb on + strand, within HGI48_RS03315 at 699.951 kb on + strand, within HGI48_RS03315 at 699.961 kb on + strand, within HGI48_RS03315 at 700.009 kb on + strand, within HGI48_RS03315 at 700.009 kb on + strand, within HGI48_RS03315 at 700.010 kb on - strand at 700.013 kb on + strand, within HGI48_RS03315 at 700.013 kb on + strand, within HGI48_RS03315 at 700.013 kb on + strand, within HGI48_RS03315 at 700.013 kb on + strand, within HGI48_RS03315 at 700.013 kb on + strand, within HGI48_RS03315 at 700.013 kb on + strand, within HGI48_RS03315 at 700.013 kb on + strand, within HGI48_RS03315 at 700.013 kb on + strand, within HGI48_RS03315 at 700.013 kb on + strand, within HGI48_RS03315 at 700.013 kb on + strand, within HGI48_RS03315 at 700.013 kb on + strand, within HGI48_RS03315 at 700.013 kb on + strand, within HGI48_RS03315 at 700.013 kb on + strand at 700.013 kb on + strand, within HGI48_RS03315 at 700.013 kb on + strand, within HGI48_RS03315 at 700.013 kb on + strand, within HGI48_RS03315 at 700.013 kb on + strand, within HGI48_RS03315 at 700.013 kb on + strand, within HGI48_RS03315 at 700.013 kb on + strand, within HGI48_RS03315 at 700.014 kb on - strand, within HGI48_RS03315 at 700.014 kb on - strand, within HGI48_RS03315 at 700.014 kb on - strand, within HGI48_RS03315 at 700.014 kb on - strand, within HGI48_RS03315 at 700.014 kb on - strand, within HGI48_RS03315 at 700.014 kb on - strand, within HGI48_RS03315 at 700.014 kb on - strand, within HGI48_RS03315 at 700.014 kb on - strand, within HGI48_RS03315 at 700.014 kb on - strand, within HGI48_RS03315 at 700.014 kb on - strand, within HGI48_RS03315 at 700.014 kb on - strand, within HGI48_RS03315 at 700.014 kb on - strand at 700.141 kb on + strand, within HGI48_RS03315 at 700.320 kb on - strand at 700.346 kb on + strand at 700.346 kb on + strand at 700.346 kb on + strand at 700.347 kb on - strand at 700.352 kb on + strand at 700.352 kb on + strand at 700.353 kb on - strand at 700.372 kb on - strand at 700.375 kb on + strand at 700.375 kb on + strand at 700.375 kb on + strand at 700.375 kb on + strand at 700.375 kb on + strand at 700.375 kb on + strand at 700.375 kb on + strand at 700.375 kb on + strand at 700.376 kb on - strand at 700.376 kb on - strand at 700.376 kb on - strand at 700.395 kb on + strand at 700.395 kb on + strand at 700.395 kb on + strand at 700.399 kb on + strand at 700.399 kb on + strand at 700.399 kb on + strand at 700.399 kb on + strand at 700.399 kb on + strand at 700.399 kb on + strand at 700.400 kb on - strand at 700.400 kb on - strand at 700.400 kb on - strand at 700.401 kb on + strand at 700.401 kb on + strand at 700.401 kb on + strand at 700.402 kb on - strand at 700.402 kb on - strand at 700.402 kb on - strand at 700.402 kb on - strand at 700.432 kb on - strand at 700.435 kb on + strand at 700.436 kb on - strand at 700.436 kb on - strand at 700.943 kb on - strand, within HGI48_RS03320 at 701.053 kb on + strand at 701.228 kb on - strand, within HGI48_RS03320
Per-strain Table
Position Strand Gene LocusTag Fraction LB remove 698,039 - +0.0 698,058 + +0.3 698,059 - +1.3 698,059 - +0.1 698,066 + +0.0 698,080 + +0.3 698,108 + -0.9 698,109 - +1.3 698,109 - +0.3 698,109 - +1.4 698,124 + +0.1 698,125 - -0.3 698,130 + -0.1 698,130 + -1.1 698,131 - -1.6 698,174 + +0.3 698,175 - +0.5 698,175 - +0.1 698,175 - -1.5 698,186 - -0.3 698,225 - +0.7 698,225 - -0.1 698,283 - HGI48_RS03310 0.14 -0.1 698,315 + HGI48_RS03310 0.18 -0.7 698,315 + HGI48_RS03310 0.18 +0.4 698,316 - HGI48_RS03310 0.18 -1.1 698,316 - HGI48_RS03310 0.18 -0.3 698,316 - HGI48_RS03310 0.18 -0.5 698,316 - HGI48_RS03310 0.18 -0.1 698,319 + HGI48_RS03310 0.18 -0.3 698,319 + HGI48_RS03310 0.18 +0.0 698,319 + HGI48_RS03310 0.18 -0.3 698,576 - HGI48_RS03310 0.51 -0.6 698,775 - HGI48_RS03310 0.77 -0.4 698,792 - -0.9 698,817 + HGI48_RS03310 0.82 -0.9 698,818 - HGI48_RS03310 0.82 -2.1 698,838 - HGI48_RS03310 0.85 +0.4 698,838 - HGI48_RS03310 0.85 -0.3 698,993 - -0.5 698,999 + +1.4 698,999 + +0.7 698,999 + -0.1 698,999 + -0.5 699,000 - -0.6 699,166 + HGI48_RS03315 0.11 -0.7 699,166 + HGI48_RS03315 0.11 -0.5 699,167 - HGI48_RS03315 0.11 -1.1 699,338 + HGI48_RS03315 0.24 +0.1 699,339 - HGI48_RS03315 0.24 +0.2 699,339 - HGI48_RS03315 0.24 -0.1 699,452 - HGI48_RS03315 0.33 +0.5 699,518 + HGI48_RS03315 0.38 -0.3 699,656 + HGI48_RS03315 0.48 +0.1 699,656 + HGI48_RS03315 0.48 -0.6 699,656 + HGI48_RS03315 0.48 +0.3 699,656 + HGI48_RS03315 0.48 +1.7 699,657 - HGI48_RS03315 0.48 -1.9 699,657 - HGI48_RS03315 0.48 +0.3 699,657 - HGI48_RS03315 0.48 -0.3 699,657 - HGI48_RS03315 0.48 +0.1 699,783 + -0.9 699,951 + HGI48_RS03315 0.70 -0.6 699,951 + HGI48_RS03315 0.70 -1.9 699,951 + HGI48_RS03315 0.70 -0.7 699,961 + HGI48_RS03315 0.71 -0.0 700,009 + HGI48_RS03315 0.74 -0.2 700,009 + HGI48_RS03315 0.74 +0.5 700,010 - -0.9 700,013 + HGI48_RS03315 0.75 -1.3 700,013 + HGI48_RS03315 0.75 -0.3 700,013 + HGI48_RS03315 0.75 +0.4 700,013 + HGI48_RS03315 0.75 +0.5 700,013 + HGI48_RS03315 0.75 +1.1 700,013 + HGI48_RS03315 0.75 +1.3 700,013 + HGI48_RS03315 0.75 +0.5 700,013 + HGI48_RS03315 0.75 +0.3 700,013 + HGI48_RS03315 0.75 -0.2 700,013 + HGI48_RS03315 0.75 -0.9 700,013 + HGI48_RS03315 0.75 -0.1 700,013 + HGI48_RS03315 0.75 +1.1 700,013 + +1.1 700,013 + HGI48_RS03315 0.75 +0.4 700,013 + HGI48_RS03315 0.75 -1.1 700,013 + HGI48_RS03315 0.75 -1.6 700,013 + HGI48_RS03315 0.75 +0.2 700,013 + HGI48_RS03315 0.75 +0.2 700,013 + HGI48_RS03315 0.75 -0.6 700,014 - HGI48_RS03315 0.75 -0.8 700,014 - HGI48_RS03315 0.75 -0.6 700,014 - HGI48_RS03315 0.75 -0.5 700,014 - HGI48_RS03315 0.75 -1.5 700,014 - HGI48_RS03315 0.75 +0.7 700,014 - HGI48_RS03315 0.75 +1.0 700,014 - HGI48_RS03315 0.75 +0.9 700,014 - HGI48_RS03315 0.75 -0.8 700,014 - HGI48_RS03315 0.75 +0.4 700,014 - HGI48_RS03315 0.75 -0.3 700,014 - HGI48_RS03315 0.75 -0.1 700,014 - +0.7 700,141 + HGI48_RS03315 0.84 -0.7 700,320 - -0.9 700,346 + +0.2 700,346 + +0.4 700,346 + +0.7 700,347 - -0.6 700,352 + -2.6 700,352 + -0.5 700,353 - -0.5 700,372 - -2.1 700,375 + +0.4 700,375 + -2.1 700,375 + +0.6 700,375 + -0.6 700,375 + +0.1 700,375 + -0.3 700,375 + +0.5 700,375 + -2.1 700,376 - -0.9 700,376 - -0.8 700,376 - +0.7 700,395 + +0.1 700,395 + +0.7 700,395 + -1.1 700,399 + -0.3 700,399 + -0.1 700,399 + -0.3 700,399 + +0.7 700,399 + -0.3 700,399 + -0.7 700,400 - +0.7 700,400 - -0.5 700,400 - -1.1 700,401 + -1.9 700,401 + -0.9 700,401 + +0.1 700,402 - -0.5 700,402 - -0.1 700,402 - -0.4 700,402 - -0.3 700,432 - -2.5 700,435 + -0.1 700,436 - -0.6 700,436 - -1.9 700,943 - HGI48_RS03320 0.41 +0.2 701,053 + +0.7 701,228 - HGI48_RS03320 0.65 -2.1
Or see this region's nucleotide sequence