Experiment: LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HGI48_RS03275 and HGI48_RS03280 are separated by 65 nucleotides HGI48_RS03280 and HGI48_RS03285 are separated by 117 nucleotides
HGI48_RS03275: HGI48_RS03275 - DEAD/DEAH family ATP-dependent RNA helicase, at 691,278 to 693,164
_RS03275
HGI48_RS03280: HGI48_RS03280 - luciferase-like monooxygenase, at 693,230 to 694,249
_RS03280
HGI48_RS03285: HGI48_RS03285 - U32 family peptidase, at 694,367 to 695,245
_RS03285
Position (kb) 693
694
695 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 692.262 kb on + strand, within HGI48_RS03275 at 692.263 kb on - strand, within HGI48_RS03275 at 692.266 kb on + strand, within HGI48_RS03275 at 692.832 kb on + strand, within HGI48_RS03275 at 692.833 kb on - strand, within HGI48_RS03275 at 692.833 kb on - strand, within HGI48_RS03275 at 693.152 kb on + strand at 693.153 kb on - strand at 693.155 kb on + strand at 693.155 kb on + strand at 693.155 kb on + strand at 693.156 kb on - strand at 693.156 kb on - strand at 693.166 kb on - strand at 693.212 kb on + strand at 693.213 kb on - strand at 693.213 kb on - strand at 693.226 kb on + strand at 693.227 kb on - strand at 693.227 kb on - strand at 693.231 kb on + strand at 693.314 kb on + strand at 693.314 kb on + strand at 693.314 kb on + strand at 693.315 kb on - strand at 693.425 kb on + strand at 693.426 kb on - strand, within HGI48_RS03280 at 693.453 kb on + strand, within HGI48_RS03280 at 693.453 kb on + strand at 693.453 kb on + strand, within HGI48_RS03280 at 693.453 kb on + strand, within HGI48_RS03280 at 693.453 kb on + strand, within HGI48_RS03280 at 693.454 kb on - strand, within HGI48_RS03280 at 693.454 kb on - strand at 693.515 kb on - strand, within HGI48_RS03280 at 693.595 kb on + strand at 693.595 kb on + strand, within HGI48_RS03280 at 693.595 kb on + strand, within HGI48_RS03280 at 693.595 kb on + strand, within HGI48_RS03280 at 693.595 kb on + strand, within HGI48_RS03280 at 693.595 kb on + strand, within HGI48_RS03280 at 693.595 kb on + strand, within HGI48_RS03280 at 693.596 kb on - strand, within HGI48_RS03280 at 693.596 kb on - strand, within HGI48_RS03280 at 693.596 kb on - strand, within HGI48_RS03280 at 693.597 kb on + strand, within HGI48_RS03280 at 693.597 kb on + strand, within HGI48_RS03280 at 693.598 kb on - strand, within HGI48_RS03280 at 693.639 kb on + strand, within HGI48_RS03280 at 693.647 kb on + strand, within HGI48_RS03280 at 693.647 kb on + strand, within HGI48_RS03280 at 693.648 kb on - strand, within HGI48_RS03280 at 693.729 kb on + strand, within HGI48_RS03280 at 693.820 kb on - strand, within HGI48_RS03280 at 693.820 kb on - strand, within HGI48_RS03280 at 693.820 kb on - strand at 693.820 kb on - strand, within HGI48_RS03280 at 693.948 kb on + strand, within HGI48_RS03280 at 693.959 kb on + strand, within HGI48_RS03280 at 693.959 kb on + strand, within HGI48_RS03280 at 693.959 kb on + strand, within HGI48_RS03280 at 693.960 kb on - strand, within HGI48_RS03280 at 694.034 kb on - strand, within HGI48_RS03280 at 694.056 kb on + strand, within HGI48_RS03280 at 694.057 kb on - strand, within HGI48_RS03280 at 694.099 kb on + strand at 694.099 kb on + strand, within HGI48_RS03280 at 694.100 kb on - strand, within HGI48_RS03280 at 694.100 kb on - strand, within HGI48_RS03280 at 694.100 kb on - strand, within HGI48_RS03280 at 694.100 kb on - strand, within HGI48_RS03280 at 694.208 kb on - strand at 694.249 kb on + strand at 694.249 kb on + strand at 694.294 kb on + strand at 694.295 kb on - strand at 694.312 kb on + strand at 694.312 kb on + strand at 694.318 kb on - strand at 694.318 kb on - strand at 694.318 kb on - strand at 694.318 kb on - strand at 694.322 kb on + strand at 694.328 kb on + strand at 694.328 kb on + strand at 694.329 kb on - strand at 694.562 kb on - strand, within HGI48_RS03285 at 694.562 kb on - strand, within HGI48_RS03285 at 694.562 kb on - strand, within HGI48_RS03285 at 694.563 kb on + strand, within HGI48_RS03285 at 694.563 kb on + strand, within HGI48_RS03285 at 694.564 kb on - strand, within HGI48_RS03285 at 694.564 kb on - strand, within HGI48_RS03285 at 694.564 kb on - strand, within HGI48_RS03285 at 694.647 kb on + strand, within HGI48_RS03285 at 694.648 kb on - strand, within HGI48_RS03285 at 694.719 kb on + strand, within HGI48_RS03285 at 694.720 kb on - strand, within HGI48_RS03285 at 694.720 kb on - strand, within HGI48_RS03285 at 694.740 kb on + strand, within HGI48_RS03285 at 694.740 kb on + strand, within HGI48_RS03285 at 694.740 kb on + strand at 694.740 kb on + strand, within HGI48_RS03285 at 694.740 kb on + strand, within HGI48_RS03285 at 694.740 kb on + strand, within HGI48_RS03285 at 694.740 kb on + strand, within HGI48_RS03285 at 694.741 kb on - strand, within HGI48_RS03285 at 694.741 kb on - strand, within HGI48_RS03285 at 694.741 kb on - strand, within HGI48_RS03285 at 694.741 kb on - strand, within HGI48_RS03285 at 694.837 kb on + strand, within HGI48_RS03285 at 694.837 kb on + strand, within HGI48_RS03285 at 694.837 kb on + strand, within HGI48_RS03285 at 694.838 kb on - strand, within HGI48_RS03285 at 694.838 kb on - strand, within HGI48_RS03285 at 694.879 kb on + strand, within HGI48_RS03285 at 694.880 kb on - strand, within HGI48_RS03285 at 694.881 kb on + strand, within HGI48_RS03285 at 694.881 kb on + strand, within HGI48_RS03285 at 694.881 kb on + strand, within HGI48_RS03285 at 694.882 kb on - strand, within HGI48_RS03285 at 694.882 kb on - strand, within HGI48_RS03285 at 694.882 kb on - strand, within HGI48_RS03285 at 694.882 kb on - strand, within HGI48_RS03285 at 694.890 kb on + strand, within HGI48_RS03285 at 694.890 kb on + strand, within HGI48_RS03285 at 694.890 kb on + strand, within HGI48_RS03285 at 694.890 kb on + strand at 694.890 kb on + strand, within HGI48_RS03285 at 694.890 kb on + strand, within HGI48_RS03285 at 694.890 kb on + strand at 694.996 kb on - strand, within HGI48_RS03285 at 695.148 kb on + strand, within HGI48_RS03285 at 695.148 kb on + strand, within HGI48_RS03285 at 695.148 kb on + strand, within HGI48_RS03285 at 695.148 kb on + strand, within HGI48_RS03285 at 695.149 kb on - strand, within HGI48_RS03285 at 695.149 kb on - strand, within HGI48_RS03285 at 695.149 kb on - strand at 695.149 kb on - strand, within HGI48_RS03285 at 695.149 kb on - strand, within HGI48_RS03285 at 695.152 kb on + strand, within HGI48_RS03285 at 695.152 kb on + strand, within HGI48_RS03285 at 695.152 kb on + strand, within HGI48_RS03285 at 695.153 kb on - strand, within HGI48_RS03285 at 695.153 kb on - strand, within HGI48_RS03285 at 695.155 kb on + strand, within HGI48_RS03285 at 695.214 kb on + strand at 695.215 kb on - strand at 695.215 kb on - strand at 695.218 kb on - strand at 695.238 kb on + strand at 695.238 kb on + strand at 695.238 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction LB remove 692,262 + HGI48_RS03275 0.52 -2.1 692,263 - HGI48_RS03275 0.52 -1.3 692,266 + HGI48_RS03275 0.52 -0.3 692,832 + HGI48_RS03275 0.82 -0.1 692,833 - HGI48_RS03275 0.82 +2.0 692,833 - HGI48_RS03275 0.82 -0.6 693,152 + +0.6 693,153 - -0.3 693,155 + -0.8 693,155 + -1.6 693,155 + -1.6 693,156 - +0.1 693,156 - -1.6 693,166 - -0.5 693,212 + +0.5 693,213 - +0.7 693,213 - +0.0 693,226 + +2.7 693,227 - +1.9 693,227 - +0.3 693,231 + -0.2 693,314 + -0.2 693,314 + +1.3 693,314 + +0.5 693,315 - +1.6 693,425 + +0.1 693,426 - HGI48_RS03280 0.19 -0.1 693,453 + HGI48_RS03280 0.22 -0.3 693,453 + +0.7 693,453 + HGI48_RS03280 0.22 +0.4 693,453 + HGI48_RS03280 0.22 +0.9 693,453 + HGI48_RS03280 0.22 -1.3 693,454 - HGI48_RS03280 0.22 -0.3 693,454 - -0.9 693,515 - HGI48_RS03280 0.28 -2.0 693,595 + -0.9 693,595 + HGI48_RS03280 0.36 -0.6 693,595 + HGI48_RS03280 0.36 -1.3 693,595 + HGI48_RS03280 0.36 +0.1 693,595 + HGI48_RS03280 0.36 -0.1 693,595 + HGI48_RS03280 0.36 +1.3 693,595 + HGI48_RS03280 0.36 -2.8 693,596 - HGI48_RS03280 0.36 +0.9 693,596 - HGI48_RS03280 0.36 +0.1 693,596 - HGI48_RS03280 0.36 -1.3 693,597 + HGI48_RS03280 0.36 +0.3 693,597 + HGI48_RS03280 0.36 -2.1 693,598 - HGI48_RS03280 0.36 -1.2 693,639 + HGI48_RS03280 0.40 +0.2 693,647 + HGI48_RS03280 0.41 +0.3 693,647 + HGI48_RS03280 0.41 +0.3 693,648 - HGI48_RS03280 0.41 +0.4 693,729 + HGI48_RS03280 0.49 -0.3 693,820 - HGI48_RS03280 0.58 -0.4 693,820 - HGI48_RS03280 0.58 +0.3 693,820 - -0.9 693,820 - HGI48_RS03280 0.58 +0.2 693,948 + HGI48_RS03280 0.70 -0.9 693,959 + HGI48_RS03280 0.71 -1.4 693,959 + HGI48_RS03280 0.71 +0.9 693,959 + HGI48_RS03280 0.71 +0.2 693,960 - HGI48_RS03280 0.72 -2.6 694,034 - HGI48_RS03280 0.79 +0.2 694,056 + HGI48_RS03280 0.81 +0.0 694,057 - HGI48_RS03280 0.81 +0.3 694,099 + +1.1 694,099 + HGI48_RS03280 0.85 +0.7 694,100 - HGI48_RS03280 0.85 +1.2 694,100 - HGI48_RS03280 0.85 +0.3 694,100 - HGI48_RS03280 0.85 +1.4 694,100 - HGI48_RS03280 0.85 -1.3 694,208 - -2.1 694,249 + +0.2 694,249 + -1.1 694,294 + +1.2 694,295 - +0.7 694,312 + -0.3 694,312 + -0.4 694,318 - +0.5 694,318 - +1.4 694,318 - +0.7 694,318 - +0.2 694,322 + -0.6 694,328 + +0.7 694,328 + +0.9 694,329 - -2.4 694,562 - HGI48_RS03285 0.22 +0.6 694,562 - HGI48_RS03285 0.22 +0.3 694,562 - HGI48_RS03285 0.22 +0.7 694,563 + HGI48_RS03285 0.22 -0.3 694,563 + HGI48_RS03285 0.22 +0.2 694,564 - HGI48_RS03285 0.22 +1.4 694,564 - HGI48_RS03285 0.22 +0.1 694,564 - HGI48_RS03285 0.22 -1.6 694,647 + HGI48_RS03285 0.32 +0.2 694,648 - HGI48_RS03285 0.32 -0.3 694,719 + HGI48_RS03285 0.40 -0.7 694,720 - HGI48_RS03285 0.40 -0.2 694,720 - HGI48_RS03285 0.40 -0.6 694,740 + HGI48_RS03285 0.42 -1.1 694,740 + HGI48_RS03285 0.42 -1.1 694,740 + +0.1 694,740 + HGI48_RS03285 0.42 +0.4 694,740 + HGI48_RS03285 0.42 +1.0 694,740 + HGI48_RS03285 0.42 -0.9 694,740 + HGI48_RS03285 0.42 -0.6 694,741 - HGI48_RS03285 0.43 -0.5 694,741 - HGI48_RS03285 0.43 +0.0 694,741 - HGI48_RS03285 0.43 +0.7 694,741 - HGI48_RS03285 0.43 -0.2 694,837 + HGI48_RS03285 0.53 +0.2 694,837 + HGI48_RS03285 0.53 +0.7 694,837 + HGI48_RS03285 0.53 -0.3 694,838 - HGI48_RS03285 0.54 -0.6 694,838 - HGI48_RS03285 0.54 -0.2 694,879 + HGI48_RS03285 0.58 -0.7 694,880 - HGI48_RS03285 0.58 -0.9 694,881 + HGI48_RS03285 0.58 -0.9 694,881 + HGI48_RS03285 0.58 -0.5 694,881 + HGI48_RS03285 0.58 +0.2 694,882 - HGI48_RS03285 0.59 -0.1 694,882 - HGI48_RS03285 0.59 -0.9 694,882 - HGI48_RS03285 0.59 -0.9 694,882 - HGI48_RS03285 0.59 -0.1 694,890 + HGI48_RS03285 0.59 +1.0 694,890 + HGI48_RS03285 0.59 -0.1 694,890 + HGI48_RS03285 0.59 +0.0 694,890 + +0.7 694,890 + HGI48_RS03285 0.59 -0.0 694,890 + HGI48_RS03285 0.59 -0.6 694,890 + +1.3 694,996 - HGI48_RS03285 0.72 +0.4 695,148 + HGI48_RS03285 0.89 -0.5 695,148 + HGI48_RS03285 0.89 +0.3 695,148 + HGI48_RS03285 0.89 -0.6 695,148 + HGI48_RS03285 0.89 -0.3 695,149 - HGI48_RS03285 0.89 +0.4 695,149 - HGI48_RS03285 0.89 +0.2 695,149 - +0.1 695,149 - HGI48_RS03285 0.89 -0.5 695,149 - HGI48_RS03285 0.89 -1.3 695,152 + HGI48_RS03285 0.89 -2.9 695,152 + HGI48_RS03285 0.89 -0.2 695,152 + HGI48_RS03285 0.89 -0.0 695,153 - HGI48_RS03285 0.89 -0.3 695,153 - HGI48_RS03285 0.89 +0.4 695,155 + HGI48_RS03285 0.90 -1.3 695,214 + +1.4 695,215 - -0.4 695,215 - -0.5 695,218 - +0.1 695,238 + +1.0 695,238 + -1.1 695,238 + -0.1
Or see this region's nucleotide sequence