Experiment: LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HGI48_RS02725 and HGI48_RS02730 are separated by 129 nucleotides HGI48_RS02730 and HGI48_RS02735 are separated by 109 nucleotides HGI48_RS02735 and HGI48_RS02740 are separated by 176 nucleotides
HGI48_RS02725: HGI48_RS02725 - glycerol-3-phosphate 1-O-acyltransferase PlsB, at 588,559 to 591,042
_RS02725
HGI48_RS02730: HGI48_RS02730 - diacylglycerol kinase, at 591,172 to 591,537
_RS02730
HGI48_RS02735: HGI48_RS02735 - repressor LexA, at 591,647 to 592,258
_RS02735
HGI48_RS02740: HGI48_RS02740 - zinc uptake transcriptional repressor Zur, at 592,435 to 592,944
_RS02740
Position (kb)
591
592 Strain fitness (log2 ratio)
-2
-1
0
1 at 591.101 kb on + strand at 591.156 kb on + strand at 591.167 kb on + strand at 591.168 kb on - strand at 591.199 kb on - strand at 591.297 kb on + strand, within HGI48_RS02730 at 591.301 kb on - strand, within HGI48_RS02730 at 591.427 kb on + strand, within HGI48_RS02730 at 591.473 kb on + strand, within HGI48_RS02730 at 591.548 kb on - strand at 591.605 kb on + strand at 591.606 kb on - strand at 591.606 kb on - strand at 591.606 kb on - strand at 591.606 kb on - strand at 591.607 kb on + strand at 591.608 kb on - strand at 591.608 kb on - strand at 591.608 kb on - strand at 592.256 kb on + strand at 592.256 kb on + strand at 592.270 kb on - strand at 592.270 kb on - strand at 592.270 kb on - strand at 592.301 kb on + strand at 592.302 kb on - strand at 592.302 kb on - strand at 592.374 kb on + strand at 592.375 kb on - strand at 592.375 kb on - strand at 592.375 kb on - strand at 592.399 kb on + strand at 592.400 kb on - strand at 592.400 kb on - strand at 592.400 kb on - strand at 592.413 kb on - strand at 592.470 kb on + strand at 592.470 kb on + strand at 592.471 kb on - strand at 592.471 kb on - strand at 592.471 kb on - strand at 592.471 kb on - strand at 592.471 kb on - strand at 592.471 kb on - strand at 592.483 kb on - strand at 592.483 kb on - strand at 592.483 kb on - strand at 592.483 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction LB remove 591,101 + -1.1 591,156 + +1.1 591,167 + -1.6 591,168 - +0.4 591,199 - -0.6 591,297 + HGI48_RS02730 0.34 +1.3 591,301 - HGI48_RS02730 0.35 +0.3 591,427 + HGI48_RS02730 0.70 -1.1 591,473 + HGI48_RS02730 0.82 +0.3 591,548 - -0.3 591,605 + +0.4 591,606 - +0.4 591,606 - -0.1 591,606 - +0.7 591,606 - +0.1 591,607 + -0.6 591,608 - -1.3 591,608 - -1.2 591,608 - +0.1 592,256 + -0.7 592,256 + -0.8 592,270 - -1.0 592,270 - +1.5 592,270 - +1.1 592,301 + +1.2 592,302 - -0.4 592,302 - -0.8 592,374 + -2.1 592,375 - +0.3 592,375 - -1.6 592,375 - +0.6 592,399 + -1.9 592,400 - -0.3 592,400 - +1.5 592,400 - -1.8 592,413 - -0.7 592,470 + -2.4 592,470 + -0.3 592,471 - -1.6 592,471 - -0.3 592,471 - +0.7 592,471 - -0.8 592,471 - +0.1 592,471 - -1.3 592,483 - -0.6 592,483 - -0.2 592,483 - -0.9 592,483 - -0.1
Or see this region's nucleotide sequence