Experiment: LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HGI48_RS02335 and HGI48_RS02340 are separated by 494 nucleotides HGI48_RS02340 and HGI48_RS02345 are separated by 21 nucleotides
HGI48_RS02335: HGI48_RS02335 - DUF1440 domain-containing protein, at 507,275 to 507,817
_RS02335
HGI48_RS02340: HGI48_RS02340 - FAD-dependent 2-octaprenylphenol hydroxylase, at 508,312 to 509,523
_RS02340
HGI48_RS02345: HGI48_RS02345 - 2-octaprenyl-6-methoxyphenyl hydroxylase, at 509,545 to 510,723
_RS02345
Position (kb) 508
509
510 Strain fitness (log2 ratio) -2
-1
0
1
2 at 507.322 kb on + strand at 507.376 kb on + strand, within HGI48_RS02335 at 507.376 kb on + strand, within HGI48_RS02335 at 507.376 kb on + strand, within HGI48_RS02335 at 507.376 kb on + strand, within HGI48_RS02335 at 507.376 kb on + strand, within HGI48_RS02335 at 507.376 kb on + strand, within HGI48_RS02335 at 507.377 kb on - strand, within HGI48_RS02335 at 507.377 kb on - strand, within HGI48_RS02335 at 507.377 kb on - strand, within HGI48_RS02335 at 507.377 kb on - strand, within HGI48_RS02335 at 507.377 kb on - strand, within HGI48_RS02335 at 507.377 kb on - strand, within HGI48_RS02335 at 507.377 kb on - strand, within HGI48_RS02335 at 507.377 kb on - strand, within HGI48_RS02335 at 507.377 kb on - strand, within HGI48_RS02335 at 507.377 kb on - strand, within HGI48_RS02335 at 507.377 kb on - strand, within HGI48_RS02335 at 507.377 kb on - strand, within HGI48_RS02335 at 507.544 kb on - strand, within HGI48_RS02335 at 507.544 kb on - strand at 507.553 kb on + strand, within HGI48_RS02335 at 507.554 kb on - strand, within HGI48_RS02335 at 507.559 kb on + strand, within HGI48_RS02335 at 507.621 kb on + strand, within HGI48_RS02335 at 507.621 kb on + strand, within HGI48_RS02335 at 507.622 kb on - strand at 507.622 kb on - strand, within HGI48_RS02335 at 507.665 kb on + strand, within HGI48_RS02335 at 507.666 kb on - strand, within HGI48_RS02335 at 507.666 kb on - strand, within HGI48_RS02335 at 507.865 kb on - strand at 507.952 kb on + strand at 508.019 kb on + strand at 508.102 kb on - strand at 509.524 kb on - strand at 509.524 kb on - strand at 509.524 kb on - strand at 509.581 kb on + strand at 509.581 kb on + strand at 509.582 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction LB remove 507,322 + -0.3 507,376 + HGI48_RS02335 0.19 +0.6 507,376 + HGI48_RS02335 0.19 +0.2 507,376 + HGI48_RS02335 0.19 +0.5 507,376 + HGI48_RS02335 0.19 -0.4 507,376 + HGI48_RS02335 0.19 -1.4 507,376 + HGI48_RS02335 0.19 -1.9 507,377 - HGI48_RS02335 0.19 +0.7 507,377 - HGI48_RS02335 0.19 +2.1 507,377 - HGI48_RS02335 0.19 -0.3 507,377 - HGI48_RS02335 0.19 +1.3 507,377 - HGI48_RS02335 0.19 +0.5 507,377 - HGI48_RS02335 0.19 -0.3 507,377 - HGI48_RS02335 0.19 -1.3 507,377 - HGI48_RS02335 0.19 +0.6 507,377 - HGI48_RS02335 0.19 -0.3 507,377 - HGI48_RS02335 0.19 +0.7 507,377 - HGI48_RS02335 0.19 -0.8 507,377 - HGI48_RS02335 0.19 +0.5 507,544 - HGI48_RS02335 0.50 -1.2 507,544 - -0.3 507,553 + HGI48_RS02335 0.51 +0.2 507,554 - HGI48_RS02335 0.51 -0.7 507,559 + HGI48_RS02335 0.52 +0.7 507,621 + HGI48_RS02335 0.64 -0.7 507,621 + HGI48_RS02335 0.64 -1.1 507,622 - +1.5 507,622 - HGI48_RS02335 0.64 +0.5 507,665 + HGI48_RS02335 0.72 -0.2 507,666 - HGI48_RS02335 0.72 -1.9 507,666 - HGI48_RS02335 0.72 -0.3 507,865 - -0.3 507,952 + +0.3 508,019 + +0.7 508,102 - -0.1 509,524 - -2.3 509,524 - +0.1 509,524 - +0.1 509,581 + +1.1 509,581 + -1.6 509,582 - +0.4
Or see this region's nucleotide sequence