Experiment: LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HGI48_RS02330 and HGI48_RS02335 are separated by 716 nucleotides HGI48_RS02335 and HGI48_RS02340 are separated by 494 nucleotides
HGI48_RS02330: HGI48_RS02330 - hypothetical protein, at 505,830 to 506,558
_RS02330
HGI48_RS02335: HGI48_RS02335 - DUF1440 domain-containing protein, at 507,275 to 507,817
_RS02335
HGI48_RS02340: HGI48_RS02340 - FAD-dependent 2-octaprenylphenol hydroxylase, at 508,312 to 509,523
_RS02340
Position (kb) 507
508 Strain fitness (log2 ratio) -2
-1
0
1
2 at 506.309 kb on + strand, within HGI48_RS02330 at 506.358 kb on - strand, within HGI48_RS02330 at 506.360 kb on + strand, within HGI48_RS02330 at 506.360 kb on + strand, within HGI48_RS02330 at 506.361 kb on - strand, within HGI48_RS02330 at 506.387 kb on - strand, within HGI48_RS02330 at 506.496 kb on + strand at 506.555 kb on - strand at 506.559 kb on - strand at 506.596 kb on - strand at 506.628 kb on - strand at 506.648 kb on - strand at 506.661 kb on + strand at 506.947 kb on - strand at 507.001 kb on + strand at 507.024 kb on + strand at 507.024 kb on + strand at 507.024 kb on + strand at 507.025 kb on - strand at 507.038 kb on - strand at 507.081 kb on + strand at 507.169 kb on + strand at 507.169 kb on + strand at 507.170 kb on - strand at 507.211 kb on + strand at 507.211 kb on + strand at 507.212 kb on - strand at 507.212 kb on - strand at 507.302 kb on - strand at 507.302 kb on - strand at 507.322 kb on + strand at 507.376 kb on + strand, within HGI48_RS02335 at 507.376 kb on + strand, within HGI48_RS02335 at 507.376 kb on + strand, within HGI48_RS02335 at 507.376 kb on + strand, within HGI48_RS02335 at 507.376 kb on + strand, within HGI48_RS02335 at 507.376 kb on + strand, within HGI48_RS02335 at 507.377 kb on - strand, within HGI48_RS02335 at 507.377 kb on - strand, within HGI48_RS02335 at 507.377 kb on - strand, within HGI48_RS02335 at 507.377 kb on - strand, within HGI48_RS02335 at 507.377 kb on - strand, within HGI48_RS02335 at 507.377 kb on - strand, within HGI48_RS02335 at 507.377 kb on - strand, within HGI48_RS02335 at 507.377 kb on - strand, within HGI48_RS02335 at 507.377 kb on - strand, within HGI48_RS02335 at 507.377 kb on - strand, within HGI48_RS02335 at 507.377 kb on - strand, within HGI48_RS02335 at 507.377 kb on - strand, within HGI48_RS02335 at 507.544 kb on - strand, within HGI48_RS02335 at 507.544 kb on - strand at 507.553 kb on + strand, within HGI48_RS02335 at 507.554 kb on - strand, within HGI48_RS02335 at 507.559 kb on + strand, within HGI48_RS02335 at 507.621 kb on + strand, within HGI48_RS02335 at 507.621 kb on + strand, within HGI48_RS02335 at 507.622 kb on - strand at 507.622 kb on - strand, within HGI48_RS02335 at 507.665 kb on + strand, within HGI48_RS02335 at 507.666 kb on - strand, within HGI48_RS02335 at 507.666 kb on - strand, within HGI48_RS02335 at 507.865 kb on - strand at 507.952 kb on + strand at 508.019 kb on + strand at 508.102 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction LB remove 506,309 + HGI48_RS02330 0.66 -1.0 506,358 - HGI48_RS02330 0.72 -0.3 506,360 + HGI48_RS02330 0.73 -0.9 506,360 + HGI48_RS02330 0.73 +1.0 506,361 - HGI48_RS02330 0.73 -0.3 506,387 - HGI48_RS02330 0.76 +0.2 506,496 + -1.3 506,555 - -0.9 506,559 - -0.6 506,596 - -0.2 506,628 - -1.6 506,648 - -0.4 506,661 + +0.4 506,947 - -0.3 507,001 + +2.1 507,024 + -0.6 507,024 + +0.1 507,024 + +1.0 507,025 - -0.2 507,038 - +0.3 507,081 + -0.7 507,169 + -0.7 507,169 + -1.5 507,170 - +0.0 507,211 + +0.1 507,211 + -0.3 507,212 - -0.0 507,212 - +0.6 507,302 - -1.3 507,302 - -1.9 507,322 + -0.3 507,376 + HGI48_RS02335 0.19 +0.6 507,376 + HGI48_RS02335 0.19 +0.2 507,376 + HGI48_RS02335 0.19 +0.5 507,376 + HGI48_RS02335 0.19 -0.4 507,376 + HGI48_RS02335 0.19 -1.4 507,376 + HGI48_RS02335 0.19 -1.9 507,377 - HGI48_RS02335 0.19 +0.7 507,377 - HGI48_RS02335 0.19 +2.1 507,377 - HGI48_RS02335 0.19 -0.3 507,377 - HGI48_RS02335 0.19 +1.3 507,377 - HGI48_RS02335 0.19 +0.5 507,377 - HGI48_RS02335 0.19 -0.3 507,377 - HGI48_RS02335 0.19 -1.3 507,377 - HGI48_RS02335 0.19 +0.6 507,377 - HGI48_RS02335 0.19 -0.3 507,377 - HGI48_RS02335 0.19 +0.7 507,377 - HGI48_RS02335 0.19 -0.8 507,377 - HGI48_RS02335 0.19 +0.5 507,544 - HGI48_RS02335 0.50 -1.2 507,544 - -0.3 507,553 + HGI48_RS02335 0.51 +0.2 507,554 - HGI48_RS02335 0.51 -0.7 507,559 + HGI48_RS02335 0.52 +0.7 507,621 + HGI48_RS02335 0.64 -0.7 507,621 + HGI48_RS02335 0.64 -1.1 507,622 - +1.5 507,622 - HGI48_RS02335 0.64 +0.5 507,665 + HGI48_RS02335 0.72 -0.2 507,666 - HGI48_RS02335 0.72 -1.9 507,666 - HGI48_RS02335 0.72 -0.3 507,865 - -0.3 507,952 + +0.3 508,019 + +0.7 508,102 - -0.1
Or see this region's nucleotide sequence