Strain Fitness in Dickeya dianthicola 67-19 around HGI48_RS00535

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
127,892	-				-0.1
127,920	+				+0.1
127,923	+				+0.5
127,924	-				-1.1
128,010	+				-0.9
128,010	+				+1.1
128,011	-				+0.3
128,066	+				-0.6
128,067	-				+0.4
128,126	+				-0.6
128,214	-				-0.1
128,226	+				+0.6
128,226	+				-0.6
128,227	-				+0.1
128,227	-				-0.5
128,227	-				+1.4
128,227	-				+0.0
128,227	-				-1.7
128,236	-				-0.9
128,420	+		HGI48_RS00525	0.78	-0.5
128,421	-		HGI48_RS00525	0.78	+0.9
128,467	+				+0.6
128,467	+				+0.9
128,468	-				-1.1
128,468	-				-0.1
128,469	+				+0.6
128,473	+				+0.9
128,473	+				+0.9
128,473	+				-0.7
128,474	-				-0.1
128,474	-				-1.5
128,474	-				-0.5
128,474	-				+0.5
128,474	-				-0.3
128,474	-				+0.4
128,474	-				-1.5
128,545	+				+0.9
128,550	+				+0.9
128,551	-				+1.1
128,551	-				+0.4
128,551	-				-0.1
128,551	-				-0.4
128,551	-				-0.7
128,586	+				+0.3
128,609	+				+0.1
128,610	-				+0.4
128,612	+				-0.1
128,612	+				+0.2
128,626	+				-0.4
128,627	-				+0.1
128,636	+		HGI48_RS00530	0.11	-0.1
128,636	+		HGI48_RS00530	0.11	+0.2
128,637	-		HGI48_RS00530	0.12	+2.0
128,640	+		HGI48_RS00530	0.13	-0.0
128,641	-		HGI48_RS00530	0.14	+1.1
128,641	-		HGI48_RS00530	0.14	-1.7
128,641	-		HGI48_RS00530	0.14	-0.6
128,735	+		HGI48_RS00530	0.57	-0.7
128,736	-		HGI48_RS00530	0.57	+0.1
128,736	-		HGI48_RS00530	0.57	+0.5
128,764	+		HGI48_RS00530	0.70	-0.0
128,791	+				+0.9
128,792	-		HGI48_RS00530	0.83	-0.9
128,812	+				+0.4
128,812	+				-1.5
128,812	+				-0.0
128,812	+				+0.4
128,812	+				+0.2
128,813	-				-1.1
128,813	-				-0.4
128,813	-				+0.6
128,819	+				-0.1
128,819	+				-0.3
128,819	+				-0.2
128,820	-				+1.6
128,846	+				-0.7
128,868	-				-0.1
128,868	-				-2.4
128,868	-				+0.4
128,868	-				+0.6
128,876	+				+0.7
128,876	+				-0.1
128,876	+				-0.5
128,876	+				+0.3
128,876	+				-0.3
128,877	-				+0.7
128,937	-		HGI48_RS00535	0.15	-0.7
129,018	+		HGI48_RS00535	0.38	+0.1
129,018	+				+1.3
129,018	+		HGI48_RS00535	0.38	-0.4
129,019	-		HGI48_RS00535	0.38	+0.5
129,019	-		HGI48_RS00535	0.38	-1.9
129,115	+		HGI48_RS00535	0.65	-0.9
129,116	-		HGI48_RS00535	0.65	+0.7
129,193	+				+0.9
129,193	+		HGI48_RS00535	0.87	+0.9
129,193	+		HGI48_RS00535	0.87	-0.7
129,193	+		HGI48_RS00535	0.87	-1.7
129,194	-		HGI48_RS00535	0.87	-0.7
129,220	-				-0.1
129,220	-				+0.9
129,243	-				-0.5
129,274	-				+0.5
129,276	+				+1.2
129,276	+				+0.3
129,276	+				-2.8
129,276	+				-0.1
129,277	-				-1.7
129,277	-				-0.6
129,277	-				-0.4
129,287	+				+0.1
129,287	+				+0.1
129,287	+				-0.7
129,291	+				-1.9
129,311	-				+0.3
129,341	+				-0.5
129,342	-				-0.1
129,343	+				-0.1
129,344	-				+0.9
129,344	-				-1.0
129,344	-				+1.3
129,346	+				+0.6
129,346	+				-1.5
129,347	-				-1.7
129,347	-				+0.0
129,347	-				+2.1
129,384	-				-0.9
129,407	+				-0.0
129,408	-				+1.3
129,585	-		HGI48_RS00540	0.21	-0.7
129,846	+				-0.7
129,846	+		HGI48_RS00540	0.51	-0.9
129,847	-		HGI48_RS00540	0.51	-0.1
129,847	-		HGI48_RS00540	0.51	+0.5
129,847	-		HGI48_RS00540	0.51	+1.2
129,847	-		HGI48_RS00540	0.51	-2.5
129,847	-		HGI48_RS00540	0.51	-0.5
129,847	-		HGI48_RS00540	0.51	+1.7
129,847	-		HGI48_RS00540	0.51	-0.7
130,167	-		HGI48_RS00540	0.88	+1.7
130,167	-		HGI48_RS00540	0.88	+0.6
130,167	-		HGI48_RS00540	0.88	-0.4
130,167	-		HGI48_RS00540	0.88	+1.3