Strain Fitness in Dickeya dianthicola 67-19 around HGI48_RS00405

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
101,077	+		HGI48_RS00395	0.17	-1.1
101,077	+				+1.3
101,077	+				+0.3
101,077	+		HGI48_RS00395	0.17	+0.4
101,077	+		HGI48_RS00395	0.17	+0.6
101,077	+		HGI48_RS00395	0.17	+0.9
101,078	-		HGI48_RS00395	0.17	+0.3
101,078	-		HGI48_RS00395	0.17	-0.1
101,395	+		HGI48_RS00395	0.69	-0.7
101,461	-		HGI48_RS00395	0.79	-1.7
101,461	-		HGI48_RS00395	0.79	-0.4
101,511	+		HGI48_RS00395	0.88	-0.3
101,511	+		HGI48_RS00395	0.88	-1.1
101,527	+				-0.8
101,527	+				-1.7
101,528	-				+1.4
101,528	-				-0.6
101,546	-				+0.1
101,546	-				-0.6
101,546	-				-0.4
101,589	-				-1.1
101,812	+		HGI48_RS00400	0.61	-2.1
101,837	-		HGI48_RS00400	0.75	-0.4
101,879	+				+0.3
101,879	+				-0.5
101,879	+				-1.5
101,879	+				+0.3
101,879	+				+1.2
101,879	+				+0.9
101,879	+				-0.6
101,879	+				+0.1
101,879	+				+0.5
101,880	-				+0.9
101,880	-				+0.5
101,880	-				-0.9
101,881	+				+0.3
101,881	+				+0.4
101,882	-				-0.3
101,882	-				+0.7
101,882	-				-0.6
101,924	+				+0.1
101,924	+				-1.0
101,930	+				-1.1
101,930	+				-0.6
101,930	+				-0.7
101,930	+				+1.1
101,930	+				-0.5
101,930	+				-1.6
101,930	+				-0.3
101,931	-				-0.1
101,931	-				+0.3
101,931	-				-0.7
101,931	-				-1.0
101,931	-				-0.7
101,931	-				-0.4
101,931	-				-0.7
101,931	-				-0.1
101,934	-				+0.6
101,978	-				-0.5
101,978	-				-4.0
101,978	-				-1.5
102,005	+				-0.7
102,005	+		HGI48_RS00405	0.12	-0.4
102,005	+		HGI48_RS00405	0.12	+0.6
102,005	+		HGI48_RS00405	0.12	-0.3
102,006	-		HGI48_RS00405	0.12	-0.1
102,090	+		HGI48_RS00405	0.20	+1.2
102,090	+		HGI48_RS00405	0.20	-0.9
102,090	+		HGI48_RS00405	0.20	-0.1
102,090	+		HGI48_RS00405	0.20	-1.5
102,090	+		HGI48_RS00405	0.20	+0.9
102,090	+		HGI48_RS00405	0.20	+0.3
102,091	-				+1.9
102,091	-				+1.6
102,091	-		HGI48_RS00405	0.20	+1.3
102,091	-		HGI48_RS00405	0.20	-0.4
102,091	-		HGI48_RS00405	0.20	-1.3
102,091	-		HGI48_RS00405	0.20	+0.6
102,091	-		HGI48_RS00405	0.20	-1.1
102,092	+		HGI48_RS00405	0.20	-1.5
102,092	+				+1.4
102,092	+				+0.3
102,092	+		HGI48_RS00405	0.20	-1.7
102,092	+		HGI48_RS00405	0.20	+1.3
102,092	+		HGI48_RS00405	0.20	+0.9
102,093	-		HGI48_RS00405	0.20	-0.1
102,093	-		HGI48_RS00405	0.20	-1.1
102,113	+				+1.3
102,113	+		HGI48_RS00405	0.22	-2.1
102,113	+		HGI48_RS00405	0.22	+0.9
102,113	+		HGI48_RS00405	0.22	+0.1
102,113	+		HGI48_RS00405	0.22	+0.5
102,114	-		HGI48_RS00405	0.22	+0.1
102,115	+		HGI48_RS00405	0.22	-1.5
102,115	+		HGI48_RS00405	0.22	-1.1
102,115	+		HGI48_RS00405	0.22	-0.1
102,115	+				-0.7
102,115	+				-0.7
102,115	+		HGI48_RS00405	0.22	-1.5
102,115	+		HGI48_RS00405	0.22	+0.9
102,116	-		HGI48_RS00405	0.23	-0.6
102,116	-		HGI48_RS00405	0.23	-0.9
102,116	-		HGI48_RS00405	0.23	-1.9
102,116	-		HGI48_RS00405	0.23	-0.7
102,116	-		HGI48_RS00405	0.23	+0.9
102,116	-		HGI48_RS00405	0.23	-0.7
102,122	+				-0.1
102,122	+				+3.4
102,122	+		HGI48_RS00405	0.23	+0.2
102,122	+		HGI48_RS00405	0.23	+1.1
102,123	-		HGI48_RS00405	0.23	-0.3
102,123	-		HGI48_RS00405	0.23	-1.1
102,123	-		HGI48_RS00405	0.23	-0.5
102,124	+		HGI48_RS00405	0.23	-0.1
102,124	+		HGI48_RS00405	0.23	-0.4
102,125	-		HGI48_RS00405	0.23	-0.6
102,125	-		HGI48_RS00405	0.23	+0.3
102,125	-		HGI48_RS00405	0.23	+0.5
102,125	-				+1.4
102,125	-		HGI48_RS00405	0.23	-0.1
102,125	-				+2.7
102,194	+				+0.9
102,194	+		HGI48_RS00405	0.30	+0.9
102,194	+				+1.4
102,194	+		HGI48_RS00405	0.30	+0.9
102,194	+		HGI48_RS00405	0.30	+0.0
102,194	+		HGI48_RS00405	0.30	-0.6
102,195	-				+0.3
102,195	-		HGI48_RS00405	0.30	-0.4
102,195	-		HGI48_RS00405	0.30	-0.0
102,195	-		HGI48_RS00405	0.30	-0.4
102,195	-		HGI48_RS00405	0.30	+1.4
102,195	-		HGI48_RS00405	0.30	-1.5
102,195	-		HGI48_RS00405	0.30	+0.3
102,277	+		HGI48_RS00405	0.37	+0.2
102,278	-		HGI48_RS00405	0.37	-0.0
102,278	-				-0.7
102,304	-		HGI48_RS00405	0.40	-0.4
102,380	+		HGI48_RS00405	0.47	-1.5
102,380	+		HGI48_RS00405	0.47	+0.4
102,469	+		HGI48_RS00405	0.55	-0.1
102,470	-		HGI48_RS00405	0.55	-0.1
102,662	-				+1.9
102,767	+		HGI48_RS00405	0.82	-0.7
102,767	+		HGI48_RS00405	0.82	-0.5
102,768	-		HGI48_RS00405	0.82	+0.7
102,768	-				+1.9
102,768	-		HGI48_RS00405	0.82	-0.1
102,768	-		HGI48_RS00405	0.82	-0.9
102,768	-		HGI48_RS00405	0.82	-0.1
102,768	-		HGI48_RS00405	0.82	-0.1
102,799	-		HGI48_RS00405	0.85	+1.1
102,837	+		HGI48_RS00405	0.89	-0.0
102,837	+		HGI48_RS00405	0.89	+0.2
102,923	+				+0.9
102,924	-				-1.5
102,955	-				+1.3
102,978	+				+0.4
102,979	-				-0.7
102,979	-				+0.3
102,979	-				-0.1
103,021	+				+0.3
103,021	+				-0.5
103,022	-				+0.3
103,022	-				-0.3
103,022	-				-1.1
103,041	-				-0.4
103,091	+		HGI48_RS00410	0.13	-0.4
103,091	+		HGI48_RS00410	0.13	+0.8
103,092	-		HGI48_RS00410	0.13	+1.1
103,095	-		HGI48_RS00410	0.13	-0.6
103,162	+		HGI48_RS00410	0.25	-0.3
103,162	+		HGI48_RS00410	0.25	+0.4
103,183	+		HGI48_RS00410	0.29	-1.5
103,183	+		HGI48_RS00410	0.29	-1.1
103,238	-		HGI48_RS00410	0.39	+0.0
103,244	+		HGI48_RS00410	0.40	-1.5
103,271	+		HGI48_RS00410	0.45	-0.7
103,271	+		HGI48_RS00410	0.45	+0.2
103,271	+		HGI48_RS00410	0.45	-0.6
103,271	+		HGI48_RS00410	0.45	-0.5
103,272	-		HGI48_RS00410	0.45	-0.3
103,272	-		HGI48_RS00410	0.45	-0.0
103,302	+		HGI48_RS00410	0.50	-0.1
103,303	-		HGI48_RS00410	0.50	+0.7
103,303	-		HGI48_RS00410	0.50	+0.9
103,303	-		HGI48_RS00410	0.50	+0.1
103,303	-		HGI48_RS00410	0.50	-0.1
103,329	-		HGI48_RS00410	0.55	-0.4
103,334	+		HGI48_RS00410	0.56	-0.1
103,334	+		HGI48_RS00410	0.56	+0.1
103,336	+		HGI48_RS00410	0.56	-0.1
103,337	-		HGI48_RS00410	0.56	-3.2
103,407	-		HGI48_RS00410	0.69	-0.6
103,407	-		HGI48_RS00410	0.69	-1.6
103,409	+		HGI48_RS00410	0.69	+1.4
103,409	+		HGI48_RS00410	0.69	+0.5
103,409	+		HGI48_RS00410	0.69	+0.4
103,409	+		HGI48_RS00410	0.69	+0.4
103,410	-				+0.9
103,412	+		HGI48_RS00410	0.70	-1.5
103,412	+		HGI48_RS00410	0.70	-1.1
103,413	-		HGI48_RS00410	0.70	-0.4
103,434	-		HGI48_RS00410	0.73	+0.1
103,435	+		HGI48_RS00410	0.74	+0.4
103,435	+		HGI48_RS00410	0.74	-1.4
103,436	-		HGI48_RS00410	0.74	+0.5
103,436	-		HGI48_RS00410	0.74	-0.6
103,436	-		HGI48_RS00410	0.74	-0.7
103,442	+		HGI48_RS00410	0.75	-1.1
103,443	-				+2.2
103,443	-		HGI48_RS00410	0.75	-0.9
103,466	+		HGI48_RS00410	0.79	-0.5
103,466	+		HGI48_RS00410	0.79	-1.1
103,467	-		HGI48_RS00410	0.79	-1.9
103,470	-		HGI48_RS00410	0.80	-0.9
103,470	-		HGI48_RS00410	0.80	+1.1
103,496	+		HGI48_RS00410	0.84	+1.2
103,510	+		HGI48_RS00410	0.87	+0.1
103,511	-		HGI48_RS00410	0.87	+0.3
103,511	-		HGI48_RS00410	0.87	+1.4
103,511	-		HGI48_RS00410	0.87	-0.1
103,514	+				+1.4
103,515	-		HGI48_RS00410	0.88	-0.9
103,542	-				-0.6
103,564	+				-0.5
103,565	-				-0.1
103,565	-				-3.0
103,565	-				+0.1
103,575	+				-0.7
103,575	+				+1.6
103,576	-				+2.3
103,576	-				+0.9
103,576	-				-0.4
103,667	+				+0.5
103,667	+				-0.5
103,667	+				+0.4
103,667	+				-0.4
103,667	+				+1.2
103,667	+				+0.7
103,667	+				-0.1
103,667	+				-0.7
103,667	+				-0.6
103,668	-				+0.1
103,668	-				-0.7
103,687	+				-0.9
103,746	+				-1.5
103,747	-				-1.0
103,890	+				+0.1
103,891	-				+0.0
103,891	-				-1.7
103,891	-				+0.5