Strain Fitness in Dickeya dianthicola 67-19 around HGI48_RS00115

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
30,021	-		HGI48_RS00110	0.69	-0.6
30,023	+		HGI48_RS00110	0.69	+0.8
30,023	+		HGI48_RS00110	0.69	+0.9
30,023	+		HGI48_RS00110	0.69	+0.6
30,037	+		HGI48_RS00110	0.70	+0.1
30,038	-		HGI48_RS00110	0.70	-0.1
30,038	-		HGI48_RS00110	0.70	+0.7
30,065	+		HGI48_RS00110	0.72	-0.5
30,131	+				+2.4
30,132	-		HGI48_RS00110	0.78	-0.6
30,311	-				-0.7
30,379	-				+1.3
30,431	+				+0.9
30,431	+				-1.1
30,458	+				+0.6
30,649	+				+1.2
31,031	-				+0.9
31,048	-				+1.9
31,048	-				+0.1
31,170	+		HGI48_RS00115	0.17	-1.0
31,171	-		HGI48_RS00115	0.17	-1.5
31,242	+		HGI48_RS00115	0.25	-0.9
31,242	+		HGI48_RS00115	0.25	-0.1
31,270	+		HGI48_RS00115	0.28	+0.3
31,270	+		HGI48_RS00115	0.28	+0.9
31,271	-		HGI48_RS00115	0.28	-1.8
31,271	-		HGI48_RS00115	0.28	+1.1
31,271	-		HGI48_RS00115	0.28	-0.4
31,380	-		HGI48_RS00115	0.41	-1.7
31,399	-		HGI48_RS00115	0.43	+0.1
31,437	+		HGI48_RS00115	0.47	-3.0
31,438	-		HGI48_RS00115	0.47	-1.1
31,496	+		HGI48_RS00115	0.54	-0.9
31,496	+				-0.1
31,497	-		HGI48_RS00115	0.54	-3.0
31,510	+		HGI48_RS00115	0.55	-0.1
31,510	+		HGI48_RS00115	0.55	-0.1
31,511	-		HGI48_RS00115	0.55	+1.0
31,511	-		HGI48_RS00115	0.55	+0.0
31,511	-		HGI48_RS00115	0.55	-1.7
31,511	-		HGI48_RS00115	0.55	+0.2
31,511	-		HGI48_RS00115	0.55	-0.9
31,511	-		HGI48_RS00115	0.55	-0.9
31,533	+		HGI48_RS00115	0.58	-0.3
31,534	-				+0.3
31,534	-		HGI48_RS00115	0.58	-0.1
31,616	+		HGI48_RS00115	0.67	+0.1
31,617	-		HGI48_RS00115	0.67	+0.9
31,617	-		HGI48_RS00115	0.67	-0.1
31,617	-		HGI48_RS00115	0.67	+0.6
31,617	-		HGI48_RS00115	0.67	+1.1
31,653	+				+2.1
31,653	+		HGI48_RS00115	0.71	-0.3
31,654	-		HGI48_RS00115	0.71	-0.1
31,654	-		HGI48_RS00115	0.71	+1.4
31,710	+		HGI48_RS00115	0.77	-0.0
31,722	+				+0.3
31,722	+		HGI48_RS00115	0.79	-0.1
31,723	-		HGI48_RS00115	0.79	-0.8
31,795	-		HGI48_RS00115	0.87	+1.2
31,803	+		HGI48_RS00115	0.88	+0.6
31,846	+				-0.3
31,846	+				-1.9
31,847	-				-0.3
31,878	+				-0.5
31,878	+				+0.4
31,887	+				+1.7
31,927	+				+0.4
31,947	+				+1.1
31,949	+				+0.1
31,949	+				-0.8
31,949	+				-0.4
31,949	+				+1.3
31,949	+				+1.2
31,950	-				+0.3
31,950	-				+0.1
31,950	-				-2.3
31,950	-				-0.2
31,950	-				-1.9
31,950	-				-0.6
31,950	-				+0.5
31,950	-				-0.2
31,953	+				-1.6
31,953	+				-1.3
31,953	+				+0.4
31,953	+				-0.5
31,953	+				+0.7
31,954	-				-1.1
31,954	-				+0.9
31,954	-				-1.7
31,954	-				-1.9
31,954	-				-0.2
31,954	-				-1.4
32,075	+				+0.2
32,105	+				+1.3
32,105	+				-0.3
32,122	-				-1.9
32,133	+				+0.9
32,133	+				-0.1
32,133	+				-0.3
32,133	+				-1.1
32,134	-				+0.9
32,134	-				+0.3
32,134	-				-0.1
32,134	-				+0.3
32,134	-				+0.4
32,134	-				-0.9
32,134	-				-1.1
32,134	-				+0.9
32,134	-				+1.4
32,134	-				-0.5
32,160	+				-1.1
32,257	+				+0.3
32,257	+				-1.7
32,258	-				-1.8
32,274	+				+0.7
32,274	+				-0.1
32,274	+				-0.5
32,274	+				+1.5
32,275	-				+1.5
32,275	-				-0.1
32,286	+				-1.1
32,286	+				+1.1
32,332	+				-0.5
32,332	+				+1.6
32,333	-				-0.1
32,333	-				+0.1
32,333	-				-0.6
32,444	-		HGI48_RS00120	0.17	-0.3
32,444	-		HGI48_RS00120	0.17	-1.8
32,527	+		HGI48_RS00120	0.35	-1.7
32,527	+		HGI48_RS00120	0.35	+0.9
32,527	+		HGI48_RS00120	0.35	-0.1
32,527	+				-0.1
32,527	+				+2.4
32,527	+		HGI48_RS00120	0.35	+0.1
32,527	+		HGI48_RS00120	0.35	-1.5
32,528	-		HGI48_RS00120	0.35	-0.7
32,528	-		HGI48_RS00120	0.35	-0.5
32,528	-		HGI48_RS00120	0.35	+0.9
32,528	-		HGI48_RS00120	0.35	-0.7
32,528	-		HGI48_RS00120	0.35	+1.2
32,528	-		HGI48_RS00120	0.35	+0.7
32,528	-				+2.2
32,587	+				+0.9
32,600	+		HGI48_RS00120	0.50	+0.3
32,600	+		HGI48_RS00120	0.50	-0.1
32,600	+		HGI48_RS00120	0.50	-0.3
32,600	+				-0.7
32,600	+		HGI48_RS00120	0.50	-2.3
32,600	+		HGI48_RS00120	0.50	-0.6
32,600	+		HGI48_RS00120	0.50	+0.4
32,601	-		HGI48_RS00120	0.50	-0.4
32,601	-		HGI48_RS00120	0.50	+0.3
32,606	+		HGI48_RS00120	0.51	-1.3
32,606	+		HGI48_RS00120	0.51	-1.5
32,607	-		HGI48_RS00120	0.52	-0.7
32,607	-				-0.1
32,607	-				+1.9
32,710	-		HGI48_RS00120	0.74	-1.5
32,710	-				+1.3
32,794	+				+1.2
32,795	-				-1.6
32,795	-				+0.2
32,795	-				-0.4
32,852	+				+0.1
32,853	-				-0.3
32,890	+				-0.5
32,890	+				+0.3
32,890	+				-0.1
32,890	+				-1.5
32,891	-				+0.0
32,891	-				-0.8
32,891	-				-0.7
32,891	-				+0.9
32,891	-				-0.1
32,896	+				+0.1