Strain Fitness in Dickeya dianthicola 67-19 around HGI48_RS20685

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
4,623,441	+		HGI48_RS20680	0.47	+0.3
4,623,547	+				+0.7
4,623,547	+		HGI48_RS20680	0.58	-0.9
4,623,547	+		HGI48_RS20680	0.58	-1.0
4,623,548	-		HGI48_RS20680	0.58	-0.7
4,623,548	-		HGI48_RS20680	0.58	-1.7
4,623,548	-		HGI48_RS20680	0.58	-0.2
4,623,563	+		HGI48_RS20680	0.60	-1.9
4,623,563	+		HGI48_RS20680	0.60	-1.3
4,623,563	+				+0.7
4,623,563	+		HGI48_RS20680	0.60	+1.5
4,623,563	+		HGI48_RS20680	0.60	-0.6
4,623,563	+		HGI48_RS20680	0.60	-0.3
4,623,564	-		HGI48_RS20680	0.60	+0.0
4,623,564	-		HGI48_RS20680	0.60	+0.2
4,623,564	-		HGI48_RS20680	0.60	-0.2
4,623,564	-		HGI48_RS20680	0.60	-0.1
4,623,564	-				+1.3
4,623,769	+		HGI48_RS20680	0.83	-1.3
4,623,823	+		HGI48_RS20680	0.88	+0.9
4,623,823	+		HGI48_RS20680	0.88	-0.9
4,623,824	-		HGI48_RS20680	0.89	-0.3
4,623,824	-		HGI48_RS20680	0.89	+0.4
4,623,851	-				+0.2
4,623,901	+				-0.7
4,623,989	+				-1.5
4,624,095	+				-0.1
4,624,096	-				-0.0
4,624,185	+				-0.9
4,624,190	-				+1.4
4,624,190	-				-1.2
4,624,193	+				+0.2
4,624,194	-				-0.3
4,624,377	+				-1.3
4,624,377	+				-0.3
4,624,410	+				-2.1
4,624,414	-				-0.2
4,624,469	+				-0.9
4,624,530	+		HGI48_RS20685	0.17	-0.5
4,624,575	+		HGI48_RS20685	0.20	-1.8
4,624,689	+		HGI48_RS20685	0.29	-0.1
4,624,696	+		HGI48_RS20685	0.29	+0.3
4,624,697	-		HGI48_RS20685	0.29	+0.1
4,624,749	+		HGI48_RS20685	0.33	-0.3
4,624,764	+		HGI48_RS20685	0.35	+0.3
4,625,043	-		HGI48_RS20685	0.56	-1.9
4,625,043	-		HGI48_RS20685	0.56	-1.1
4,625,043	-		HGI48_RS20685	0.56	-0.7
4,625,043	-		HGI48_RS20685	0.56	-1.2
4,625,046	-		HGI48_RS20685	0.56	-2.9
4,625,063	-		HGI48_RS20685	0.58	-1.1
4,625,086	+		HGI48_RS20685	0.59	-1.8
4,625,086	+		HGI48_RS20685	0.59	-1.9
4,625,086	+		HGI48_RS20685	0.59	-1.7
4,625,087	-		HGI48_RS20685	0.60	+0.1
4,625,087	-		HGI48_RS20685	0.60	+1.3
4,625,087	-		HGI48_RS20685	0.60	+0.4
4,625,087	-				+0.7
4,625,087	-		HGI48_RS20685	0.60	-1.7
4,625,087	-		HGI48_RS20685	0.60	-1.0
4,625,087	-		HGI48_RS20685	0.60	-0.2
4,625,087	-		HGI48_RS20685	0.60	-0.9
4,625,093	+		HGI48_RS20685	0.60	-0.3
4,625,098	-		HGI48_RS20685	0.60	-0.9
4,625,119	-				+1.9
4,625,119	-				+0.7
4,625,119	-		HGI48_RS20685	0.62	-0.3
4,625,154	+		HGI48_RS20685	0.65	-1.1
4,625,154	+		HGI48_RS20685	0.65	-0.4
4,625,347	+		HGI48_RS20685	0.80	-0.4
4,625,347	+		HGI48_RS20685	0.80	-1.2
4,625,348	-		HGI48_RS20685	0.80	-0.5
4,625,537	+				+0.3
4,625,537	+				+0.7
4,625,636	+				+0.7
4,625,636	+				+1.9
4,625,637	-				-0.2
4,625,652	+				-0.3
4,625,660	+				-0.6
4,625,660	+				+0.0
4,625,661	-				-0.4
4,625,661	-				-0.9
4,625,661	-				-1.3
4,625,683	-				+0.6
4,625,731	+				+1.0
4,625,731	+				-0.4
4,625,731	+				-2.1
4,625,731	+				+0.5
4,625,731	+				+0.2
4,625,731	+				-0.3
4,625,732	-				-1.6
4,625,732	-				-0.6
4,625,819	-				+1.9
4,625,819	-		HGI48_RS20690	0.16	-0.4
4,625,901	+		HGI48_RS20690	0.25	-0.4
4,625,901	+		HGI48_RS20690	0.25	-0.3
4,625,902	-				+0.7
4,625,902	-		HGI48_RS20690	0.25	+0.0
4,625,902	-		HGI48_RS20690	0.25	+0.3
4,625,902	-		HGI48_RS20690	0.25	-1.7
4,626,075	+		HGI48_RS20690	0.44	+0.3
4,626,109	+		HGI48_RS20690	0.48	+0.1
4,626,109	+		HGI48_RS20690	0.48	-0.3
4,626,109	+				+1.7
4,626,109	+		HGI48_RS20690	0.48	-1.9
4,626,109	+		HGI48_RS20690	0.48	+1.2
4,626,109	+		HGI48_RS20690	0.48	-1.3
4,626,109	+		HGI48_RS20690	0.48	+1.2
4,626,109	+		HGI48_RS20690	0.48	+1.0
4,626,109	+		HGI48_RS20690	0.48	-0.6
4,626,109	+		HGI48_RS20690	0.48	-0.0
4,626,110	-		HGI48_RS20690	0.48	-1.7
4,626,110	-		HGI48_RS20690	0.48	-0.1
4,626,110	-		HGI48_RS20690	0.48	-0.6
4,626,110	-				-0.9
4,626,110	-				-0.3
4,626,110	-		HGI48_RS20690	0.48	+0.3
4,626,110	-		HGI48_RS20690	0.48	-0.3
4,626,110	-		HGI48_RS20690	0.48	-0.1
4,626,110	-		HGI48_RS20690	0.48	-0.3
4,626,215	-		HGI48_RS20690	0.60	-2.1
4,626,215	-		HGI48_RS20690	0.60	-0.3
4,626,300	+		HGI48_RS20690	0.69	-1.7
4,626,435	+		HGI48_RS20690	0.85	+0.3
4,626,436	-		HGI48_RS20690	0.85	-1.8
4,626,538	+				-0.6
4,626,566	+				+1.0
4,626,566	+				+1.7
4,626,566	+				-0.0
4,626,566	+				-0.1
4,626,566	+				+0.1
4,626,566	+				+0.7
4,626,567	-				+0.5
4,626,567	-				+0.1
4,626,570	-				+0.1