Strain Fitness in Dickeya dianthicola 67-19 around HGI48_RS20680

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
4,622,019	+		HGI48_RS20675	0.13	-1.3
4,622,020	-		HGI48_RS20675	0.13	+0.1
4,622,020	-		HGI48_RS20675	0.13	-0.3
4,622,031	+		HGI48_RS20675	0.14	-0.1
4,622,032	-		HGI48_RS20675	0.14	-1.2
4,622,607	+		HGI48_RS20675	0.78	-1.3
4,622,607	+		HGI48_RS20675	0.78	-0.1
4,622,607	+		HGI48_RS20675	0.78	-1.6
4,622,608	-		HGI48_RS20675	0.78	-1.6
4,622,608	-		HGI48_RS20675	0.78	+0.3
4,622,608	-		HGI48_RS20675	0.78	-1.6
4,622,608	-		HGI48_RS20675	0.78	+1.3
4,622,763	+				-0.5
4,622,764	-				+0.1
4,622,764	-				-1.6
4,622,764	-				-0.5
4,622,846	+				-0.7
4,622,846	+				-0.9
4,622,846	+				-0.3
4,622,860	+				-0.0
4,622,860	+				+2.5
4,622,861	-				+0.8
4,622,861	-				-0.2
4,622,893	+				+1.3
4,622,893	+				-1.2
4,622,893	+				+1.0
4,622,893	+				+0.4
4,622,893	+				-0.5
4,622,894	-				+1.5
4,622,894	-				+1.0
4,622,894	-				-0.7
4,622,894	-				+0.4
4,622,894	-				-0.8
4,622,894	-				+1.0
4,622,894	-				+1.5
4,622,894	-				+0.4
4,622,894	-				-2.1
4,622,894	-				-0.0
4,622,894	-				-0.3
4,622,895	+				+0.1
4,622,895	+				+0.4
4,622,895	+				-0.6
4,622,895	+				+0.2
4,622,896	-				-0.1
4,622,896	-				-0.5
4,622,896	-				+0.7
4,622,896	-				-1.3
4,622,896	-				-0.9
4,622,896	-				-0.5
4,622,896	-				+0.8
4,622,896	-				+0.0
4,622,903	+				-0.1
4,622,904	-				-0.4
4,622,904	-				+0.3
4,622,905	+				+1.3
4,622,905	+				-0.6
4,622,906	-				+0.0
4,622,945	+				-0.9
4,622,952	+				+2.7
4,622,952	+				-0.5
4,622,952	+				+0.1
4,622,952	+				-1.1
4,622,952	+				-0.4
4,622,952	+				-1.1
4,622,952	+				+0.1
4,622,952	+				-2.1
4,622,953	-				-0.1
4,622,953	-				+0.7
4,622,953	-				-1.0
4,622,953	-				-1.3
4,622,953	-				-0.9
4,622,953	-				-0.3
4,622,953	-				-0.2
4,622,956	+				-2.1
4,622,956	+				-0.0
4,622,956	+				+0.1
4,622,956	+				+0.3
4,622,956	+				+0.1
4,622,956	+				+0.2
4,622,956	+				-0.9
4,622,956	+				+0.1
4,622,956	+				-2.3
4,622,956	+				-1.3
4,622,956	+				-0.5
4,622,956	+				-0.1
4,622,956	+				+0.7
4,622,956	+				-0.3
4,622,956	+				-0.2
4,622,957	-				+0.7
4,622,957	-				-0.1
4,622,957	-				-0.3
4,622,957	-				+1.7
4,622,957	-				+0.7
4,622,957	-				+1.5
4,622,957	-				-0.1
4,622,957	-				-0.1
4,622,957	-				-0.3
4,622,957	-				-0.3
4,622,957	-				-1.7
4,622,957	-				-0.3
4,623,157	+				+0.1
4,623,232	+		HGI48_RS20680	0.24	-0.3
4,623,311	+		HGI48_RS20680	0.32	-0.6
4,623,311	+		HGI48_RS20680	0.32	-0.1
4,623,441	+		HGI48_RS20680	0.47	+0.3
4,623,547	+				+0.7
4,623,547	+		HGI48_RS20680	0.58	-0.9
4,623,547	+		HGI48_RS20680	0.58	-1.0
4,623,548	-		HGI48_RS20680	0.58	-0.7
4,623,548	-		HGI48_RS20680	0.58	-1.7
4,623,548	-		HGI48_RS20680	0.58	-0.2
4,623,563	+		HGI48_RS20680	0.60	-1.9
4,623,563	+		HGI48_RS20680	0.60	-1.3
4,623,563	+				+0.7
4,623,563	+		HGI48_RS20680	0.60	+1.5
4,623,563	+		HGI48_RS20680	0.60	-0.6
4,623,563	+		HGI48_RS20680	0.60	-0.3
4,623,564	-		HGI48_RS20680	0.60	+0.0
4,623,564	-		HGI48_RS20680	0.60	+0.2
4,623,564	-		HGI48_RS20680	0.60	-0.2
4,623,564	-		HGI48_RS20680	0.60	-0.1
4,623,564	-				+1.3
4,623,769	+		HGI48_RS20680	0.83	-1.3
4,623,823	+		HGI48_RS20680	0.88	+0.9
4,623,823	+		HGI48_RS20680	0.88	-0.9
4,623,824	-		HGI48_RS20680	0.89	-0.3
4,623,824	-		HGI48_RS20680	0.89	+0.4
4,623,851	-				+0.2
4,623,901	+				-0.7
4,623,989	+				-1.5
4,624,095	+				-0.1
4,624,096	-				-0.0
4,624,185	+				-0.9
4,624,190	-				+1.4
4,624,190	-				-1.2
4,624,193	+				+0.2
4,624,194	-				-0.3
4,624,377	+				-1.3
4,624,377	+				-0.3
4,624,410	+				-2.1
4,624,414	-				-0.2
4,624,469	+				-0.9
4,624,530	+		HGI48_RS20685	0.17	-0.5
4,624,575	+		HGI48_RS20685	0.20	-1.8
4,624,689	+		HGI48_RS20685	0.29	-0.1
4,624,696	+		HGI48_RS20685	0.29	+0.3
4,624,697	-		HGI48_RS20685	0.29	+0.1
4,624,749	+		HGI48_RS20685	0.33	-0.3
4,624,764	+		HGI48_RS20685	0.35	+0.3