Strain Fitness in Dickeya dianthicola 67-19 around HGI48_RS20670

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
4,619,138	+		HGI48_RS20665	0.69	-1.3
4,619,333	+		HGI48_RS20665	0.81	+1.2
4,619,334	-				+1.7
4,619,334	-		HGI48_RS20665	0.81	-0.7
4,619,429	-		HGI48_RS20665	0.87	-0.3
4,619,429	-		HGI48_RS20665	0.87	+1.0
4,619,614	+				+1.0
4,619,614	+				-0.6
4,619,637	+				-1.1
4,619,654	+				+0.0
4,619,654	+				+0.7
4,619,655	-				+0.2
4,619,655	-				-0.1
4,619,655	-				-1.5
4,619,655	-				-1.6
4,619,655	-				-0.1
4,619,658	-				-0.4
4,619,695	-				+0.2
4,619,695	-				+0.1
4,619,707	+				+1.3
4,619,707	+				+1.3
4,619,707	+				+0.8
4,619,707	+				+0.4
4,619,708	-				-0.9
4,619,708	-				+0.1
4,619,708	-				-0.3
4,619,708	-				-0.3
4,619,708	-				-2.0
4,619,708	-				+0.1
4,619,708	-				-1.6
4,619,708	-				+0.7
4,619,708	-				-0.5
4,619,708	-				+0.7
4,619,757	+				-0.9
4,619,758	-				+0.7
4,619,758	-				+0.1
4,619,758	-				-0.9
4,619,831	+				+0.0
4,619,835	+				-2.3
4,619,835	+				+0.4
4,619,835	+				+1.9
4,619,836	-				-1.3
4,619,836	-				+0.1
4,619,836	-				+1.5
4,619,836	-				-0.3
4,619,893	+				-1.2
4,619,901	-				-0.2
4,620,027	+				+0.5
4,620,027	+				-1.3
4,620,028	-				+1.4
4,620,028	-				-0.9
4,620,028	-				+1.4
4,620,028	-				+0.1
4,620,028	-				+0.4
4,620,030	+				+2.5
4,620,031	-				-0.1
4,620,031	-				+0.0
4,620,034	-				-0.9
4,620,034	-				+0.6
4,620,074	+				-0.3
4,620,401	-		HGI48_RS20670	0.18	+0.7
4,620,433	-		HGI48_RS20670	0.20	+1.8
4,620,457	-		HGI48_RS20670	0.21	+0.2
4,620,470	-		HGI48_RS20670	0.22	+0.3
4,620,470	-		HGI48_RS20670	0.22	-1.6
4,620,470	-		HGI48_RS20670	0.22	-2.1
4,620,732	+		HGI48_RS20670	0.38	+0.7
4,620,785	+		HGI48_RS20670	0.41	+0.2
4,620,786	-		HGI48_RS20670	0.41	+1.5
4,620,786	-		HGI48_RS20670	0.41	-1.5
4,620,786	-		HGI48_RS20670	0.41	+0.3
4,620,796	+				+0.1
4,620,796	+		HGI48_RS20670	0.42	-1.2
4,620,797	-		HGI48_RS20670	0.42	-0.8
4,620,811	-		HGI48_RS20670	0.43	+1.0
4,620,811	-		HGI48_RS20670	0.43	+1.3
4,621,202	-		HGI48_RS20670	0.67	+0.1
4,621,205	-				-0.9
4,621,758	+				-1.1
4,621,758	+				-0.3
4,621,758	+				+0.2
4,621,758	+				-0.0
4,621,759	-				-2.1
4,621,790	+				-1.0
4,621,790	+				-2.1
4,621,791	-				-0.5
4,621,792	+				-0.1
4,621,810	-				+0.3
4,621,826	+				-0.0
4,621,826	+				+0.4
4,621,826	+				-2.5
4,621,827	-				+0.1
4,621,827	-				+0.9
4,621,829	+				+0.1
4,621,829	+				-0.3
4,621,830	-				-0.7
4,621,830	-				-0.3
4,621,929	+				-0.9
4,622,019	+		HGI48_RS20675	0.13	-1.3
4,622,020	-		HGI48_RS20675	0.13	+0.1
4,622,020	-		HGI48_RS20675	0.13	-0.3
4,622,031	+		HGI48_RS20675	0.14	-0.1
4,622,032	-		HGI48_RS20675	0.14	-1.2
4,622,607	+		HGI48_RS20675	0.78	-1.3
4,622,607	+		HGI48_RS20675	0.78	-0.1
4,622,607	+		HGI48_RS20675	0.78	-1.6
4,622,608	-		HGI48_RS20675	0.78	-1.6
4,622,608	-		HGI48_RS20675	0.78	+0.3
4,622,608	-		HGI48_RS20675	0.78	-1.6
4,622,608	-		HGI48_RS20675	0.78	+1.3