Strain Fitness in Dickeya dianthicola 67-19 around HGI48_RS20450

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
4,571,771	+		HGI48_RS20445	0.15	+0.0
4,571,771	+		HGI48_RS20445	0.15	+1.0
4,571,906	+		HGI48_RS20445	0.27	-0.2
4,572,105	+		HGI48_RS20445	0.46	-0.3
4,572,105	+		HGI48_RS20445	0.46	-0.6
4,572,105	+		HGI48_RS20445	0.46	-0.9
4,572,105	+		HGI48_RS20445	0.46	-0.2
4,572,105	+		HGI48_RS20445	0.46	-0.3
4,572,105	+		HGI48_RS20445	0.46	+2.1
4,572,105	+		HGI48_RS20445	0.46	+0.1
4,572,105	+		HGI48_RS20445	0.46	+0.7
4,572,106	-		HGI48_RS20445	0.46	-0.5
4,572,106	-		HGI48_RS20445	0.46	-1.4
4,572,116	-		HGI48_RS20445	0.47	+0.3
4,572,147	-		HGI48_RS20445	0.50	-0.5
4,572,147	-		HGI48_RS20445	0.50	-0.2
4,572,147	-		HGI48_RS20445	0.50	-0.7
4,572,147	-		HGI48_RS20445	0.50	-2.1
4,572,182	-		HGI48_RS20445	0.53	-0.1
4,572,231	-				+1.7
4,572,231	-				+0.7
4,572,231	-		HGI48_RS20445	0.58	-0.4
4,572,231	-		HGI48_RS20445	0.58	-0.7
4,572,231	-		HGI48_RS20445	0.58	+1.2
4,572,232	+		HGI48_RS20445	0.58	-0.5
4,572,232	+		HGI48_RS20445	0.58	-0.1
4,572,232	+		HGI48_RS20445	0.58	+0.4
4,572,232	+		HGI48_RS20445	0.58	-1.6
4,572,232	+		HGI48_RS20445	0.58	+0.4
4,572,233	-		HGI48_RS20445	0.58	+0.5
4,572,233	-		HGI48_RS20445	0.58	-1.0
4,572,233	-		HGI48_RS20445	0.58	-1.6
4,572,233	-		HGI48_RS20445	0.58	-2.1
4,572,233	-		HGI48_RS20445	0.58	-1.4
4,572,233	-		HGI48_RS20445	0.58	+0.7
4,572,233	-		HGI48_RS20445	0.58	-0.3
4,572,275	+		HGI48_RS20445	0.62	-0.0
4,572,276	-		HGI48_RS20445	0.62	-0.6
4,572,276	-		HGI48_RS20445	0.62	-1.2
4,572,276	-		HGI48_RS20445	0.62	-1.3
4,572,276	-		HGI48_RS20445	0.62	-0.9
4,572,299	+		HGI48_RS20445	0.64	-0.1
4,572,540	+		HGI48_RS20445	0.86	+1.0
4,572,540	+		HGI48_RS20445	0.86	-0.2
4,572,540	+		HGI48_RS20445	0.86	+1.3
4,572,540	+		HGI48_RS20445	0.86	-0.0
4,572,540	+		HGI48_RS20445	0.86	-0.4
4,572,540	+				+1.4
4,572,540	+		HGI48_RS20445	0.86	-3.0
4,572,540	+		HGI48_RS20445	0.86	-0.9
4,572,541	-		HGI48_RS20445	0.86	+1.0
4,572,541	-		HGI48_RS20445	0.86	-1.6
4,572,541	-		HGI48_RS20445	0.86	+0.5
4,572,541	-		HGI48_RS20445	0.86	+0.4
4,572,541	-		HGI48_RS20445	0.86	+0.1
4,572,543	+		HGI48_RS20445	0.87	+0.5
4,572,543	+		HGI48_RS20445	0.87	-0.2
4,572,543	+		HGI48_RS20445	0.87	+0.1
4,572,543	+		HGI48_RS20445	0.87	-1.3
4,572,543	+		HGI48_RS20445	0.87	+0.3
4,572,543	+		HGI48_RS20445	0.87	+1.3
4,572,544	-		HGI48_RS20445	0.87	-0.1
4,572,544	-		HGI48_RS20445	0.87	-1.6
4,572,646	+				+1.0
4,572,655	+				-0.2
4,572,655	+				+0.3
4,572,684	-				-1.4
4,573,151	+		HGI48_RS20450	0.45	-0.5
4,573,151	+		HGI48_RS20450	0.45	+0.3
4,573,151	+		HGI48_RS20450	0.45	-0.3
4,573,151	+		HGI48_RS20450	0.45	-0.1
4,573,152	-				-0.9
4,573,152	-		HGI48_RS20450	0.45	-0.9
4,573,152	-		HGI48_RS20450	0.45	-0.9
4,573,152	-		HGI48_RS20450	0.45	-0.1
4,573,152	-				-0.3
4,573,152	-		HGI48_RS20450	0.45	-0.3
4,573,221	+		HGI48_RS20450	0.52	-0.5
4,573,564	+		HGI48_RS20450	0.89	-0.3
4,573,564	+		HGI48_RS20450	0.89	-1.1
4,573,564	+		HGI48_RS20450	0.89	-0.2
4,573,578	-				-2.3
4,573,692	+				+0.1
4,573,693	-				-0.3
4,573,701	+				-1.2
4,573,701	+				+0.0
4,573,701	+				+1.7
4,573,701	+				-0.7
4,573,702	-				-2.1
4,573,766	-				-0.8
4,573,766	-				-0.6
4,573,766	-				-1.3
4,573,766	-				+0.2
4,573,766	-				+0.1
4,573,766	-				-1.5
4,573,772	-				+1.3
4,573,772	-				+1.5
4,573,832	-		HGI48_RS20455	0.15	-1.3
4,573,856	-		HGI48_RS20455	0.20	-0.7
4,573,867	-		HGI48_RS20455	0.22	-1.6
4,574,180	-		HGI48_RS20455	0.81	-0.4
4,574,180	-		HGI48_RS20455	0.81	-1.3
4,574,213	+		HGI48_RS20455	0.87	+0.1
4,574,214	-		HGI48_RS20455	0.87	-1.6
4,574,225	+		HGI48_RS20455	0.89	-1.3
4,574,235	+				+1.4
4,574,235	+				-0.2
4,574,235	+				-1.3
4,574,236	-				+0.4
4,574,236	-				+0.3
4,574,236	-				+0.7
4,574,236	-				-0.1
4,574,266	+				+0.1
4,574,280	+				+0.7
4,574,291	+				-0.3
4,574,291	+				-1.1
4,574,292	-				+0.4
4,574,292	-				+0.1
4,574,292	-				-0.3
4,574,292	-				-1.1
4,574,318	-				+0.4
4,574,318	-				+0.2
4,574,318	-				+0.1
4,574,333	+				+1.3
4,574,333	+				+0.0
4,574,333	+				+0.5
4,574,333	+				-0.2
4,574,333	+				-1.7
4,574,334	-				-0.0
4,574,334	-				-1.6
4,574,334	-				-0.5
4,574,334	-				-1.1
4,574,334	-				+1.1
4,574,337	+				-1.6
4,574,337	+				+0.7
4,574,337	+				-1.3
4,574,337	+				+1.1
4,574,337	+				-0.7
4,574,337	+				+0.7
4,574,337	+				+0.4
4,574,337	+				-0.3
4,574,337	+				+1.5
4,574,338	-				-2.3
4,574,338	-				-0.8
4,574,338	-				-2.6
4,574,338	-				-0.1
4,574,338	-				+0.7
4,574,338	-				-0.6
4,574,562	+				-0.9