Strain Fitness in Dickeya dianthicola 67-19 around HGI48_RS19435

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
4,341,684	-				-2.4
4,341,762	-				-1.1
4,341,764	-				-0.1
4,341,764	-				-1.4
4,341,779	+				+0.5
4,341,780	-				-1.0
4,341,811	+		HGI48_RS19425	0.11	+1.5
4,341,811	+		HGI48_RS19425	0.11	-1.0
4,341,830	+		HGI48_RS19425	0.18	-1.4
4,341,842	-		HGI48_RS19425	0.22	-0.0
4,341,842	-		HGI48_RS19425	0.22	-2.6
4,341,868	+		HGI48_RS19425	0.31	+0.4
4,341,902	+		HGI48_RS19425	0.43	+0.6
4,342,057	-				-2.2
4,342,099	+				-1.4
4,342,099	+				-0.1
4,342,099	+				+0.6
4,342,100	-				+0.6
4,342,100	-				-2.5
4,342,100	-				+0.9
4,342,100	-				-0.4
4,342,208	-		HGI48_RS19430	0.36	+1.0
4,342,225	+		HGI48_RS19430	0.41	+0.0
4,342,225	+		HGI48_RS19430	0.41	-1.4
4,342,225	+		HGI48_RS19430	0.41	-2.1
4,342,225	+		HGI48_RS19430	0.41	-0.7
4,342,225	+		HGI48_RS19430	0.41	+0.4
4,342,253	+		HGI48_RS19430	0.49	+0.3
4,342,255	+		HGI48_RS19430	0.49	-0.1
4,342,255	+		HGI48_RS19430	0.49	-1.5
4,342,256	-		HGI48_RS19430	0.50	-1.2
4,342,256	-		HGI48_RS19430	0.50	-0.6
4,342,412	+				+0.6
4,342,413	-				-0.4
4,342,416	+				-2.2
4,342,520	-				-0.4
4,342,553	+		HGI48_RS19435	0.25	-1.7
4,342,554	-		HGI48_RS19435	0.26	-1.6
4,342,554	-				+1.0
4,342,722	+		HGI48_RS19435	0.69	-0.5
4,342,838	+				+0.2
4,342,838	+				+0.0
4,342,839	-				+0.6
4,342,839	-				-0.8
4,342,839	-				-0.5
4,342,839	-				-1.4
4,342,890	-				-1.8
4,342,890	-				+0.6
4,342,890	-				-1.4
4,342,915	-				+1.0
4,342,974	-		HGI48_RS19440	0.18	+0.2
4,343,078	-		HGI48_RS19440	0.33	-0.4
4,343,078	-		HGI48_RS19440	0.33	-1.0
4,343,078	-		HGI48_RS19440	0.33	-0.3
4,343,243	-		HGI48_RS19440	0.55	-0.3
4,343,267	+		HGI48_RS19440	0.59	-2.4
4,343,268	-		HGI48_RS19440	0.59	-0.1
4,343,268	-		HGI48_RS19440	0.59	+0.6
4,343,350	-				-1.0
4,343,377	-		HGI48_RS19440	0.74	+1.5
4,343,377	-				+1.0
4,343,472	-				+0.6
4,343,472	-		HGI48_RS19440	0.87	-0.3
4,343,547	+				-2.8
4,343,560	-				-0.4
4,343,560	-				+1.0
4,343,592	-				-1.1
4,343,592	-				-2.0
4,343,592	-				+1.2
4,343,600	-				-0.4
4,343,620	-				-0.1
4,343,626	+				-0.0
4,343,626	+				-0.5
4,343,627	-				-1.1
4,343,627	-				+0.3
4,343,647	+				-2.2
4,343,647	+				+0.9
4,343,647	+				-0.3
4,343,648	-				+0.8
4,343,648	-				+1.5
4,343,679	-				-1.7
4,343,679	-				-2.2
4,343,679	-				-1.7
4,343,679	-				-2.5
4,343,689	+				-0.1
4,343,690	-				+2.2
4,343,690	-				+0.6
4,343,695	-				-0.0
4,343,703	+				-0.4
4,343,703	+				+0.3
4,343,704	-				+0.2
4,343,704	-				+0.1
4,343,704	-				+0.6
4,343,704	-				+0.3
4,343,721	-				+0.2
4,343,721	-				+0.6
4,343,721	-				-1.2
4,343,721	-				-0.7
4,343,793	+				+1.9
4,343,794	-				+1.0
4,343,794	-				-0.6
4,343,797	+				-1.4
4,343,797	+				-0.9
4,343,808	-				+0.0
4,343,831	+				+1.0
4,343,832	-				+0.1
4,343,832	-				-0.6
4,343,839	-				+0.3