Strain Fitness in Dickeya dianthicola 67-19 around HGI48_RS19045
Experiment: LB
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | LB |
---|---|---|---|---|---|
remove | |||||
4,273,016 | + | +0.0 | |||
4,273,016 | + | -1.2 | |||
4,273,016 | + | +0.0 | |||
4,273,016 | + | +0.3 | |||
4,273,016 | + | +1.8 | |||
4,273,017 | - | +0.4 | |||
4,273,034 | + | -1.0 | |||
4,273,036 | + | +1.6 | |||
4,273,036 | + | +0.6 | |||
4,274,061 | + | -1.6 | |||
4,274,061 | + | -0.1 | |||
4,274,062 | - | -0.0 | |||
4,274,234 | + | -2.3 | |||
4,274,368 | + | HGI48_RS19050 | 0.10 | -2.0 | |
4,274,369 | - | HGI48_RS19050 | 0.10 | -1.0 | |
4,274,369 | - | HGI48_RS19050 | 0.10 | -0.6 | |
4,274,400 | + | HGI48_RS19050 | 0.11 | -0.7 | |
4,274,401 | - | HGI48_RS19050 | 0.11 | -1.7 | |
4,274,560 | - | HGI48_RS19050 | 0.16 | -0.5 | |
4,274,582 | - | HGI48_RS19050 | 0.17 | -0.1 | |
4,274,582 | - | HGI48_RS19050 | 0.17 | +0.4 | |
4,274,663 | + | HGI48_RS19050 | 0.19 | -1.1 | |
4,274,719 | - | HGI48_RS19050 | 0.21 | -0.1 | |
4,274,919 | + | HGI48_RS19050 | 0.27 | -1.9 | |
4,274,919 | + | HGI48_RS19050 | 0.27 | -1.1 | |
4,274,919 | + | HGI48_RS19050 | 0.27 | -0.3 | |
4,274,920 | - | HGI48_RS19050 | 0.27 | +0.4 | |
4,274,920 | - | HGI48_RS19050 | 0.27 | -0.0 | |
4,274,920 | - | HGI48_RS19050 | 0.27 | -0.4 |
Or see this region's nucleotide sequence