Strain Fitness in Dickeya dianthicola 67-19 around HGI48_RS18605

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
4,175,479	-				-1.0
4,175,540	-				-2.0
4,175,540	-				+0.0
4,175,545	+				+0.6
4,175,546	-				+0.2
4,175,546	-				-0.4
4,175,685	+		HGI48_RS18600	0.11	+0.4
4,175,742	+				+0.6
4,175,743	-		HGI48_RS18600	0.18	-0.2
4,175,765	+		HGI48_RS18600	0.21	-0.2
4,175,785	-		HGI48_RS18600	0.23	-1.4
4,175,823	-		HGI48_RS18600	0.28	+0.2
4,175,832	-		HGI48_RS18600	0.29	+0.6
4,175,842	+		HGI48_RS18600	0.30	-0.1
4,175,842	+		HGI48_RS18600	0.30	-0.7
4,175,843	-		HGI48_RS18600	0.31	+0.4
4,175,843	-		HGI48_RS18600	0.31	-0.6
4,175,843	-				+1.0
4,175,844	+		HGI48_RS18600	0.31	-0.6
4,175,844	+		HGI48_RS18600	0.31	-2.0
4,175,844	+		HGI48_RS18600	0.31	-1.2
4,175,844	+		HGI48_RS18600	0.31	+1.2
4,175,844	+				-1.0
4,175,844	+		HGI48_RS18600	0.31	+1.0
4,175,845	-		HGI48_RS18600	0.31	-1.7
4,175,845	-				-0.0
4,175,847	-				-1.0
4,175,847	-		HGI48_RS18600	0.31	-1.7
4,175,900	+				+1.6
4,175,901	-		HGI48_RS18600	0.38	+0.3
4,175,989	-		HGI48_RS18600	0.49	-0.2
4,176,048	-		HGI48_RS18600	0.57	-1.2
4,176,057	-				+2.2
4,176,095	+		HGI48_RS18600	0.62	+0.3
4,176,104	+		HGI48_RS18600	0.64	+1.7
4,176,105	-				-0.0
4,176,164	-		HGI48_RS18600	0.71	-1.3
4,176,333	+				+1.1
4,176,388	+				+0.8
4,176,391	+				+0.2
4,176,442	+				-0.9
4,176,443	-				-1.2
4,176,443	-				+0.4
4,176,520	+		HGI48_RS18605	0.17	+0.3
4,176,521	-		HGI48_RS18605	0.17	-0.2
4,176,560	+		HGI48_RS18605	0.23	-0.8
4,176,587	+		HGI48_RS18605	0.26	-0.3
4,176,587	+		HGI48_RS18605	0.26	+0.1
4,176,588	-		HGI48_RS18605	0.27	-1.0
4,176,612	+		HGI48_RS18605	0.30	+0.6
4,176,620	+		HGI48_RS18605	0.31	-0.0
4,176,621	-		HGI48_RS18605	0.31	+1.4
4,176,666	+		HGI48_RS18605	0.37	-1.6
4,176,667	-		HGI48_RS18605	0.37	-0.2
4,176,742	+		HGI48_RS18605	0.48	-1.7
4,176,742	+		HGI48_RS18605	0.48	-0.2
4,176,742	+				+1.2
4,176,742	+		HGI48_RS18605	0.48	+1.6
4,176,743	-		HGI48_RS18605	0.48	+0.1
4,176,743	-		HGI48_RS18605	0.48	-0.0
4,176,745	-		HGI48_RS18605	0.48	+0.3
4,176,792	+		HGI48_RS18605	0.54	-0.2
4,176,831	+		HGI48_RS18605	0.60	+0.4
4,176,831	+		HGI48_RS18605	0.60	-1.1
4,176,831	+		HGI48_RS18605	0.60	+0.3
4,176,854	-		HGI48_RS18605	0.63	-3.0
4,176,865	-		HGI48_RS18605	0.64	+0.6
4,176,889	-		HGI48_RS18605	0.68	-0.0
4,176,897	+		HGI48_RS18605	0.69	+0.4
4,176,952	+		HGI48_RS18605	0.76	-0.6
4,176,999	+		HGI48_RS18605	0.83	+0.3
4,177,068	-				-0.6
4,177,084	-				-0.4
4,177,110	-				+0.4
4,177,114	-				+0.6
4,177,117	+				-1.0
4,177,287	-		HGI48_RS18610	0.16	-0.0
4,177,311	-		HGI48_RS18610	0.19	+0.6
4,177,335	+		HGI48_RS18610	0.21	+0.6
4,177,409	-		HGI48_RS18610	0.29	-1.7
4,177,483	+		HGI48_RS18610	0.37	-0.2
4,177,491	+		HGI48_RS18610	0.38	+0.3
4,177,578	-		HGI48_RS18610	0.47	-0.9
4,177,604	-		HGI48_RS18610	0.50	+0.6
4,177,707	-		HGI48_RS18610	0.61	-2.0
4,177,750	+		HGI48_RS18610	0.65	-0.7
4,177,779	-		HGI48_RS18610	0.68	-0.0
4,177,784	-		HGI48_RS18610	0.69	-1.4
4,177,784	-		HGI48_RS18610	0.69	+0.6
4,177,873	+		HGI48_RS18610	0.78	-2.4
4,178,030	-				+1.0
4,178,085	+				+0.8