Strain Fitness in Dickeya dianthicola 67-19 around HGI48_RS17900

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
4,016,345	+				-1.8
4,016,345	+				-0.4
4,016,345	+				-2.1
4,016,345	+				-0.3
4,016,345	+				+0.1
4,016,345	+				-1.1
4,016,345	+				+0.5
4,016,346	-				-0.2
4,016,346	-				-0.1
4,016,346	-				-1.1
4,016,346	-				+0.0
4,016,346	-				-1.5
4,016,346	-				+0.3
4,016,346	-				-0.5
4,016,346	-				-0.1
4,016,346	-				+0.1
4,016,347	+				+0.8
4,016,347	+				+0.7
4,016,348	-				+0.5
4,016,348	-				+1.3
4,016,348	-				-2.1
4,016,376	+				+0.8
4,016,376	+				+2.1
4,016,376	+				-1.2
4,016,376	+				-0.9
4,016,376	+				-0.2
4,016,377	-				-0.1
4,016,377	-				+0.5
4,016,377	-				-1.1
4,016,434	+				+0.3
4,016,435	-				-3.3
4,016,467	+				+0.9
4,016,468	-				+1.1
4,016,468	-				+1.5
4,016,513	+				-0.5
4,016,669	-				-0.6
4,016,669	-				+0.8
4,016,696	-				-0.6
4,016,765	+		HGI48_RS17895	0.21	-0.5
4,016,814	-		HGI48_RS17895	0.32	-1.1
4,016,815	+				+0.5
4,016,815	+		HGI48_RS17895	0.32	-0.9
4,016,816	-				+2.4
4,016,816	-		HGI48_RS17895	0.32	+0.1
4,016,909	+		HGI48_RS17895	0.53	-1.5
4,016,910	-		HGI48_RS17895	0.54	-0.2
4,016,910	-		HGI48_RS17895	0.54	+0.5
4,016,945	-		HGI48_RS17895	0.61	+0.1
4,017,004	+		HGI48_RS17895	0.75	-0.9
4,017,061	+		HGI48_RS17895	0.88	+0.8
4,017,062	-		HGI48_RS17895	0.88	-0.7
4,017,104	-				-1.5
4,017,137	+				-0.5
4,017,155	+				-1.9
4,017,156	-				-0.8
4,017,156	-				+0.6
4,017,156	-				-1.1
4,017,156	-				+1.5
4,017,497	+		HGI48_RS17900	0.25	+1.0
4,017,497	+		HGI48_RS17900	0.25	+0.4
4,017,498	-		HGI48_RS17900	0.26	-0.5
4,017,498	-		HGI48_RS17900	0.26	-0.7
4,017,501	+		HGI48_RS17900	0.26	-0.6
4,017,501	+				+0.9
4,017,502	-		HGI48_RS17900	0.26	+1.2
4,017,513	-		HGI48_RS17900	0.27	+0.3
4,017,592	-		HGI48_RS17900	0.32	-0.2
4,017,653	-				-1.1
4,017,841	-				-1.1
4,017,856	+				+1.7
4,017,856	+		HGI48_RS17900	0.50	-1.2
4,017,856	+		HGI48_RS17900	0.50	-1.5
4,017,857	-		HGI48_RS17900	0.50	+0.0
4,017,857	-		HGI48_RS17900	0.50	-0.1
4,017,894	+		HGI48_RS17900	0.52	-0.1
4,017,894	+		HGI48_RS17900	0.52	+0.8
4,017,895	-		HGI48_RS17900	0.52	-0.4
4,017,915	+		HGI48_RS17900	0.54	-1.8
4,017,915	+		HGI48_RS17900	0.54	-0.1
4,018,095	-		HGI48_RS17900	0.66	+0.4
4,018,336	+		HGI48_RS17900	0.82	-0.8
4,018,354	+		HGI48_RS17900	0.84	-0.5
4,018,354	+		HGI48_RS17900	0.84	-0.5
4,018,354	+		HGI48_RS17900	0.84	-2.3
4,018,355	-		HGI48_RS17900	0.84	-1.5
4,018,355	-		HGI48_RS17900	0.84	+0.3
4,018,355	-		HGI48_RS17900	0.84	+1.3
4,018,355	-		HGI48_RS17900	0.84	-0.7
4,018,355	-		HGI48_RS17900	0.84	+0.3
4,018,355	-		HGI48_RS17900	0.84	-0.2
4,018,624	+				-1.5
4,018,624	+				-2.3
4,018,624	+				+0.4
4,018,624	+				-0.8
4,018,624	+				+0.1
4,018,625	-				-0.1
4,018,699	+				+0.2
4,018,700	-				-0.1
4,018,700	-				-0.6
4,018,753	+		HGI48_RS17905	0.12	-1.1
4,018,753	+		HGI48_RS17905	0.12	-0.5
4,018,753	+		HGI48_RS17905	0.12	+0.1
4,018,753	+				-1.1
4,018,753	+		HGI48_RS17905	0.12	-0.5
4,018,754	-		HGI48_RS17905	0.12	+0.1
4,018,754	-		HGI48_RS17905	0.12	-0.5
4,018,937	+		HGI48_RS17905	0.27	-0.1
4,018,946	+		HGI48_RS17905	0.28	-1.3
4,018,946	+				-0.1
4,018,946	+		HGI48_RS17905	0.28	+0.3
4,018,946	+		HGI48_RS17905	0.28	-0.4
4,018,946	+		HGI48_RS17905	0.28	-0.2
4,018,946	+		HGI48_RS17905	0.28	-0.7
4,018,946	+				-1.1
4,018,946	+		HGI48_RS17905	0.28	+0.6
4,018,946	+		HGI48_RS17905	0.28	-0.7
4,018,946	+		HGI48_RS17905	0.28	+0.0
4,018,946	+		HGI48_RS17905	0.28	-1.1
4,018,947	-		HGI48_RS17905	0.28	-0.5
4,018,947	-		HGI48_RS17905	0.28	-0.2
4,018,947	-		HGI48_RS17905	0.28	-0.5
4,018,947	-		HGI48_RS17905	0.28	-0.7
4,019,050	+		HGI48_RS17905	0.37	-0.1
4,019,051	-		HGI48_RS17905	0.37	-0.5
4,019,141	+		HGI48_RS17905	0.44	+0.6
4,019,141	+		HGI48_RS17905	0.44	+1.1
4,019,159	+		HGI48_RS17905	0.46	-0.6
4,019,160	-		HGI48_RS17905	0.46	+1.4
4,019,182	+		HGI48_RS17905	0.48	-0.7
4,019,182	+		HGI48_RS17905	0.48	+1.1
4,019,182	+		HGI48_RS17905	0.48	-0.7
4,019,182	+		HGI48_RS17905	0.48	-3.4
4,019,182	+		HGI48_RS17905	0.48	+0.0
4,019,182	+		HGI48_RS17905	0.48	+0.8
4,019,183	-		HGI48_RS17905	0.48	+0.7
4,019,234	+		HGI48_RS17905	0.52	-0.0
4,019,235	-				-1.1
4,019,235	-		HGI48_RS17905	0.52	-0.5
4,019,259	+		HGI48_RS17905	0.54	-1.5
4,019,259	+		HGI48_RS17905	0.54	+0.3
4,019,259	+		HGI48_RS17905	0.54	+0.5
4,019,260	-		HGI48_RS17905	0.54	+0.0
4,019,260	-		HGI48_RS17905	0.54	+0.7
4,019,309	+		HGI48_RS17905	0.58	-0.1
4,019,310	-		HGI48_RS17905	0.58	+0.0
4,019,351	+		HGI48_RS17905	0.62	-0.2
4,019,352	-		HGI48_RS17905	0.62	-0.6
4,019,385	-		HGI48_RS17905	0.65	-0.6
4,019,415	+		HGI48_RS17905	0.67	-0.1
4,019,416	-		HGI48_RS17905	0.67	+0.0
4,019,557	-		HGI48_RS17905	0.79	-0.1
4,019,557	-		HGI48_RS17905	0.79	-0.1
4,019,557	-		HGI48_RS17905	0.79	+0.0
4,019,557	-		HGI48_RS17905	0.79	-0.7
4,019,557	-		HGI48_RS17905	0.79	+0.1
4,019,557	-		HGI48_RS17905	0.79	-0.4