Strain Fitness in Dickeya dianthicola 67-19 around HGI48_RS17840

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
4,002,495	-				+2.1
4,002,585	-		HGI48_RS17835	0.43	+0.7
4,002,585	-		HGI48_RS17835	0.43	-1.6
4,002,653	+				-0.1
4,002,653	+		HGI48_RS17835	0.49	-2.3
4,002,654	-		HGI48_RS17835	0.49	+0.2
4,002,654	-		HGI48_RS17835	0.49	-0.7
4,002,654	-		HGI48_RS17835	0.49	+0.5
4,002,691	+		HGI48_RS17835	0.52	-2.7
4,002,692	-				-0.1
4,002,707	+		HGI48_RS17835	0.54	-0.3
4,002,707	+		HGI48_RS17835	0.54	+0.7
4,002,708	-		HGI48_RS17835	0.54	-1.3
4,002,708	-		HGI48_RS17835	0.54	+0.2
4,002,708	-		HGI48_RS17835	0.54	+0.2
4,002,708	-		HGI48_RS17835	0.54	+0.1
4,002,753	-		HGI48_RS17835	0.58	+0.3
4,002,781	+		HGI48_RS17835	0.60	-0.5
4,002,781	+		HGI48_RS17835	0.60	-1.4
4,002,911	-		HGI48_RS17835	0.71	-0.1
4,002,956	+		HGI48_RS17835	0.75	+0.5
4,002,956	+				-0.5
4,002,956	+		HGI48_RS17835	0.75	+0.8
4,002,956	+		HGI48_RS17835	0.75	+1.3
4,002,956	+		HGI48_RS17835	0.75	+0.1
4,002,956	+		HGI48_RS17835	0.75	-2.5
4,002,956	+		HGI48_RS17835	0.75	-1.8
4,002,956	+		HGI48_RS17835	0.75	+0.2
4,002,956	+		HGI48_RS17835	0.75	+0.0
4,002,956	+		HGI48_RS17835	0.75	-0.3
4,002,956	+				-0.1
4,002,956	+				+1.9
4,002,957	-		HGI48_RS17835	0.75	-1.7
4,002,957	-		HGI48_RS17835	0.75	-1.0
4,002,957	-		HGI48_RS17835	0.75	+0.0
4,002,957	-		HGI48_RS17835	0.75	-0.8
4,002,957	-		HGI48_RS17835	0.75	-0.1
4,002,957	-		HGI48_RS17835	0.75	-1.2
4,002,957	-		HGI48_RS17835	0.75	-0.7
4,002,957	-		HGI48_RS17835	0.75	-0.5
4,002,957	-		HGI48_RS17835	0.75	-1.1
4,002,957	-		HGI48_RS17835	0.75	-0.4
4,002,957	-		HGI48_RS17835	0.75	+1.0
4,002,957	-		HGI48_RS17835	0.75	-0.1
4,002,957	-		HGI48_RS17835	0.75	+1.0
4,003,103	+				+1.1
4,003,104	-		HGI48_RS17835	0.87	+1.5
4,003,172	+				-1.5
4,003,172	+				+0.9
4,003,173	-				-0.6
4,003,240	+				-0.1
4,003,240	+				-0.3
4,003,241	-				-0.2
4,003,241	-				-0.3
4,003,307	+				+0.5
4,003,308	-				+0.4
4,003,308	-				-0.5
4,003,308	-				+0.3
4,003,308	-				-1.5
4,003,308	-				-1.2
4,003,308	-				+0.5
4,003,308	-				-0.2
4,004,124	+		HGI48_RS17840	0.48	-1.1
4,005,017	-				+1.1
4,005,027	-				-1.0
4,005,027	-				-1.8