Strain Fitness in Dickeya dianthicola 67-19 around HGI48_RS17810

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
3,993,501	+				+0.8
3,993,502	-				+0.7
3,993,505	+				+0.1
3,993,505	+				-0.1
3,993,506	-				-0.9
3,993,506	-				-0.2
3,993,526	+				-0.7
3,993,526	+				+0.0
3,993,526	+				+0.5
3,993,526	+				-1.5
3,993,527	-				-0.1
3,993,645	+				+1.1
3,993,645	+				-0.9
3,993,646	-				-0.4
3,993,646	-				-1.0
3,993,646	-				-0.7
3,993,646	-				-1.1
3,993,646	-				-0.3
3,993,655	-				+0.5
3,993,663	+				+0.5
3,993,703	+				-1.5
3,993,703	+				-0.2
3,993,704	-				+0.3
3,993,722	+				-0.2
3,993,722	+				+0.1
3,993,734	+				+1.0
3,993,735	-				-1.1
3,993,735	-				-1.1
3,993,834	+		HGI48_RS17805	0.23	-0.8
3,993,861	+		HGI48_RS17805	0.29	-1.5
3,993,861	+		HGI48_RS17805	0.29	-0.9
3,993,961	+		HGI48_RS17805	0.50	-2.1
3,994,177	+				+1.5
3,994,178	-				-1.1
3,994,195	-				-0.2
3,994,202	+				-1.1
3,994,202	+				+0.5
3,994,202	+				+0.5
3,994,203	-				-1.5
3,994,203	-				-0.5
3,994,203	-				+0.5
3,994,367	+		HGI48_RS17810	0.24	-0.4
3,994,499	+		HGI48_RS17810	0.43	-1.0
3,994,580	+		HGI48_RS17810	0.55	-1.5
3,994,580	+				-0.5
3,994,581	-		HGI48_RS17810	0.55	-1.8
3,994,611	+		HGI48_RS17810	0.60	-0.3
3,994,612	-		HGI48_RS17810	0.60	-0.3
3,994,612	-		HGI48_RS17810	0.60	-1.3
3,994,612	-		HGI48_RS17810	0.60	+0.0
3,994,612	-		HGI48_RS17810	0.60	-0.5
3,994,612	-		HGI48_RS17810	0.60	+0.4
3,994,612	-		HGI48_RS17810	0.60	+0.5
3,994,692	-		HGI48_RS17810	0.71	-0.4
3,994,815	+		HGI48_RS17810	0.89	-0.1
3,994,815	+		HGI48_RS17810	0.89	+0.2
3,994,815	+		HGI48_RS17810	0.89	+1.0
3,994,816	-		HGI48_RS17810	0.90	+0.3
3,994,816	-		HGI48_RS17810	0.90	+1.5
3,994,816	-		HGI48_RS17810	0.90	-1.1
3,994,816	-		HGI48_RS17810	0.90	-0.3
3,994,816	-		HGI48_RS17810	0.90	-1.9
3,994,882	+				+0.4
3,994,884	+				-0.9
3,994,954	+				-0.3
3,994,954	+				-1.8
3,994,955	-				+0.5
3,994,965	+				+0.1
3,994,965	+				+0.5
3,994,966	-				+0.2
3,994,966	-				+0.3
3,994,966	-				-0.7
3,995,019	+				-0.3
3,995,019	+				+2.0
3,995,019	+				-2.1
3,995,019	+				+0.3
3,995,123	+				-0.6
3,995,123	+				-1.2
3,995,123	+				-0.0
3,995,124	-				+0.9
3,995,124	-				+0.2
3,995,124	-				-2.1
3,995,124	-				+0.5
3,995,256	+		HGI48_RS17815	0.17	+0.3
3,995,257	-		HGI48_RS17815	0.17	+0.5
3,995,257	-		HGI48_RS17815	0.17	+0.0
3,995,362	-				+0.5
3,995,362	-		HGI48_RS17815	0.23	+0.1
3,995,362	-		HGI48_RS17815	0.23	+0.1
3,995,371	+		HGI48_RS17815	0.24	-1.8
3,995,372	-				+1.5
3,995,372	-				+1.5
3,995,391	+		HGI48_RS17815	0.25	+0.5
3,995,392	-				+0.5
3,995,470	+		HGI48_RS17815	0.30	-0.1
3,995,481	+		HGI48_RS17815	0.30	-1.7
3,995,481	+		HGI48_RS17815	0.30	-0.5
3,995,482	-		HGI48_RS17815	0.30	-0.5
3,995,482	-		HGI48_RS17815	0.30	+0.3
3,995,482	-		HGI48_RS17815	0.30	-1.1
3,995,482	-		HGI48_RS17815	0.30	+0.6
3,995,493	+				-1.1
3,995,493	+		HGI48_RS17815	0.31	-0.0
3,995,493	+		HGI48_RS17815	0.31	-0.9
3,995,532	+		HGI48_RS17815	0.34	+1.7
3,995,587	-		HGI48_RS17815	0.37	-0.4
3,995,667	+		HGI48_RS17815	0.42	+0.8
3,995,668	-		HGI48_RS17815	0.42	-0.2
3,995,668	-				+0.5
3,995,668	-		HGI48_RS17815	0.42	-0.0
3,995,734	-		HGI48_RS17815	0.46	-2.5
3,995,826	+		HGI48_RS17815	0.51	-0.6
3,995,829	+		HGI48_RS17815	0.52	-0.5
3,995,830	-		HGI48_RS17815	0.52	-2.6
3,995,833	+		HGI48_RS17815	0.52	-2.1
3,995,866	+		HGI48_RS17815	0.54	+0.2
3,995,866	+		HGI48_RS17815	0.54	-0.2