Strain Fitness in Dickeya dianthicola 67-19 around HGI48_RS17545

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
3,925,388	-		HGI48_RS17540	0.43	+0.5
3,925,393	+		HGI48_RS17540	0.44	-0.7
3,925,393	+		HGI48_RS17540	0.44	-0.4
3,925,393	+		HGI48_RS17540	0.44	-0.2
3,925,393	+				+0.9
3,925,393	+		HGI48_RS17540	0.44	-1.7
3,925,393	+		HGI48_RS17540	0.44	+0.0
3,925,394	-		HGI48_RS17540	0.44	-0.7
3,925,394	-		HGI48_RS17540	0.44	-0.5
3,925,394	-		HGI48_RS17540	0.44	-0.5
3,925,394	-		HGI48_RS17540	0.44	-3.0
3,925,394	-		HGI48_RS17540	0.44	+0.3
3,925,394	-		HGI48_RS17540	0.44	-0.6
3,925,397	+		HGI48_RS17540	0.44	-2.2
3,925,398	-		HGI48_RS17540	0.44	+1.0
3,925,398	-		HGI48_RS17540	0.44	-0.3
3,925,461	+		HGI48_RS17540	0.51	-0.7
3,925,462	-		HGI48_RS17540	0.51	+0.2
3,925,462	-		HGI48_RS17540	0.51	-0.9
3,925,462	-		HGI48_RS17540	0.51	+0.7
3,925,493	-		HGI48_RS17540	0.54	+0.0
3,925,541	+		HGI48_RS17540	0.59	-1.7
3,925,661	+		HGI48_RS17540	0.71	-1.5
3,925,661	+				+0.5
3,925,755	-		HGI48_RS17540	0.81	+0.3
3,925,760	+		HGI48_RS17540	0.81	+1.3
3,925,760	+				+0.5
3,925,761	-		HGI48_RS17540	0.81	+0.1
3,925,761	-		HGI48_RS17540	0.81	-0.4
3,925,761	-				+0.5
3,925,761	-		HGI48_RS17540	0.81	-0.9
3,925,761	-		HGI48_RS17540	0.81	-0.9
3,925,761	-				-0.1
3,925,862	+				+1.3
3,925,882	+				+0.2
3,925,883	-				+0.2
3,926,049	+				-0.2
3,926,049	+				+1.0
3,926,049	+				-2.5
3,926,050	-				+0.5
3,926,052	+				-0.1
3,926,053	-				+0.8
3,926,063	+				-0.6
3,926,063	+				-0.5
3,926,063	+				-0.1
3,926,063	+				-1.1
3,926,064	-				+0.5
3,926,067	+				-1.3
3,926,067	+				+0.3
3,926,090	-				-1.5
3,926,090	-				+0.0
3,926,128	+				-1.0
3,926,129	-				-0.5
3,926,129	-				-1.5
3,926,129	-				+0.5
3,926,129	-				+1.8
3,926,154	+				-0.6
3,926,166	+		HGI48_RS17545	0.12	+0.4
3,926,166	+		HGI48_RS17545	0.12	+2.2
3,926,166	+		HGI48_RS17545	0.12	-0.7
3,926,356	+		HGI48_RS17545	0.80	-0.7
3,926,362	+		HGI48_RS17545	0.83	-0.7
3,926,363	-		HGI48_RS17545	0.83	-0.4
3,926,363	-		HGI48_RS17545	0.83	-2.0
3,926,374	+		HGI48_RS17545	0.87	+0.2
3,926,375	-				-0.1
3,926,376	+		HGI48_RS17545	0.88	-0.5
3,926,407	+				-1.1
3,926,492	+				-0.2
3,926,503	+				-0.7
3,926,515	+				-0.3
3,926,515	+				-0.5
3,926,516	-				+0.5
3,926,592	+				-0.7
3,926,592	+				-0.8
3,926,593	-				+1.5
3,926,593	-				+0.7
3,926,609	+				+0.2
3,926,634	+				-0.1
3,926,634	+				+1.7
3,926,634	+				-0.3
3,926,635	-				-0.9
3,926,635	-				-2.7
3,926,639	+				-0.5
3,926,640	-				+1.3
3,926,643	+				+1.2
3,926,643	+				-1.5
3,926,643	+				-0.4
3,926,643	+				-0.6
3,926,643	+				-0.5
3,926,643	+				-0.7
3,926,644	-				+0.3
3,926,644	-				-1.3
3,926,644	-				-0.1
3,926,644	-				+0.2
3,926,644	-				-0.0
3,926,644	-				-1.1
3,926,644	-				-1.5
3,926,644	-				+0.9
3,926,658	+				-0.8
3,926,659	-				+0.7
3,926,687	-				-0.2
3,926,711	-				+0.5
3,926,713	+				+0.4
3,926,713	+				+0.3
3,926,713	+				-0.9
3,926,714	-				-0.6
3,926,790	+				+0.6
3,926,790	+				+0.1
3,926,790	+				-0.2
3,926,790	+				-1.3
3,926,790	+				-0.5
3,926,790	+				-1.3
3,926,791	-				-0.9
3,926,791	-				+0.9
3,926,791	-				+0.2
3,926,791	-				+0.2
3,926,808	+				-0.1
3,926,808	+				+0.2
3,926,808	+				-2.5
3,926,808	+				-0.0
3,926,809	-				-0.8
3,926,858	+				+1.3
3,926,872	+				-0.3
3,926,872	+				+0.7
3,926,873	-				+0.4
3,926,873	-				+0.5
3,926,873	-				-1.1
3,927,167	+				+1.1
3,927,168	-		HGI48_RS17550	0.25	-2.1
3,927,194	+		HGI48_RS17550	0.27	-1.5
3,927,195	-		HGI48_RS17550	0.27	+0.2
3,927,208	+		HGI48_RS17550	0.28	-0.9
3,927,209	-				+1.5
3,927,209	-		HGI48_RS17550	0.28	-0.1
3,927,247	+		HGI48_RS17550	0.30	+1.0
3,927,247	+				-1.1
3,927,247	+		HGI48_RS17550	0.30	-0.4
3,927,247	+		HGI48_RS17550	0.30	+1.0
3,927,247	+		HGI48_RS17550	0.30	+1.0
3,927,247	+		HGI48_RS17550	0.30	-0.4
3,927,247	+		HGI48_RS17550	0.30	+1.3
3,927,248	-		HGI48_RS17550	0.30	-0.5
3,927,248	-		HGI48_RS17550	0.30	+0.9
3,927,248	-		HGI48_RS17550	0.30	-0.8
3,927,248	-		HGI48_RS17550	0.30	-1.8
3,927,248	-				-0.1
3,927,272	+		HGI48_RS17550	0.32	+0.6
3,927,392	+		HGI48_RS17550	0.41	+0.2
3,927,404	+		HGI48_RS17550	0.42	+0.5
3,927,404	+		HGI48_RS17550	0.42	-1.0
3,927,404	+		HGI48_RS17550	0.42	-0.5
3,927,404	+		HGI48_RS17550	0.42	+0.2
3,927,405	-		HGI48_RS17550	0.42	+0.1
3,927,405	-		HGI48_RS17550	0.42	+1.5
3,927,405	-		HGI48_RS17550	0.42	+0.8
3,927,405	-		HGI48_RS17550	0.42	-1.1
3,927,405	-		HGI48_RS17550	0.42	+1.3