Strain Fitness in Dickeya dianthicola 67-19 around HGI48_RS16930

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
3,787,263	+				-0.2
3,787,263	+				-0.3
3,787,264	-				-0.1
3,787,276	-				+0.0
3,787,276	-				+0.0
3,787,278	+				-0.6
3,787,279	-				+0.6
3,787,286	+				+0.3
3,787,303	+				-1.9
3,787,303	+				-0.8
3,787,336	-				-1.6
3,787,425	+		HGI48_RS16925	0.12	+0.8
3,787,425	+		HGI48_RS16925	0.12	-0.1
3,787,426	-				-0.6
3,787,426	-		HGI48_RS16925	0.12	+0.7
3,787,426	-				-0.1
3,787,481	+		HGI48_RS16925	0.19	-2.1
3,787,481	+		HGI48_RS16925	0.19	-2.7
3,787,531	+		HGI48_RS16925	0.25	-1.4
3,787,531	+		HGI48_RS16925	0.25	-0.6
3,787,532	-		HGI48_RS16925	0.25	-1.0
3,787,627	+		HGI48_RS16925	0.37	-0.3
3,787,628	-		HGI48_RS16925	0.37	-0.6
3,787,629	+		HGI48_RS16925	0.37	+0.4
3,787,630	-		HGI48_RS16925	0.37	+0.7
3,787,939	+		HGI48_RS16925	0.75	+0.2
3,787,939	+		HGI48_RS16925	0.75	-0.1
3,787,940	-		HGI48_RS16925	0.75	-0.3
3,788,006	-		HGI48_RS16925	0.83	-0.4
3,788,038	-		HGI48_RS16925	0.87	+0.1
3,788,038	-		HGI48_RS16925	0.87	-0.6
3,788,111	+				+0.5
3,788,111	+				-0.9
3,788,111	+				+0.5
3,788,116	-				-0.1
3,788,116	-				-0.9
3,788,116	-				-0.9
3,788,149	-				-0.7
3,788,149	-				+1.3
3,788,185	+				+0.2
3,788,200	+				+0.0
3,788,200	+				+1.5
3,788,209	+				-1.5
3,788,235	+				-0.5
3,788,236	-				-0.3
3,788,256	+				-0.1
3,788,267	+				+0.6
3,788,267	+				+0.1
3,788,267	+				+0.3
3,788,267	+				-0.5
3,788,268	-				+0.1
3,788,268	-				+0.0
3,788,271	+				-0.0
3,788,272	-				-0.0
3,788,272	-				-0.5
3,788,272	-				-0.5
3,788,272	-				+0.5
3,788,272	-				-1.9
3,788,272	-				+0.3
3,788,413	+		HGI48_RS16930	0.38	-0.5
3,788,414	-		HGI48_RS16930	0.38	+1.1
3,788,414	-		HGI48_RS16930	0.38	-0.4
3,788,414	-		HGI48_RS16930	0.38	+0.6
3,788,414	-		HGI48_RS16930	0.38	+1.8
3,788,415	+		HGI48_RS16930	0.39	+0.0
3,788,416	-		HGI48_RS16930	0.39	-0.6
3,788,435	+		HGI48_RS16930	0.44	-0.2
3,788,598	+		HGI48_RS16930	0.84	-2.1
3,788,678	+				+0.9
3,788,679	-				-1.1
3,788,679	-				+1.5
3,788,706	+				+1.5
3,788,706	+				+0.6
3,788,707	-				-1.1
3,788,707	-				-1.7
3,788,707	-				+1.5
3,788,707	-				+0.3
3,788,707	-				-0.9
3,788,707	-				-0.5
3,788,707	-				+0.0
3,788,708	+				+0.2
3,788,748	-		HGI48_RS16935	0.12	+0.0
3,788,767	+		HGI48_RS16935	0.15	+0.1
3,788,767	+		HGI48_RS16935	0.15	-0.1
3,788,767	+		HGI48_RS16935	0.15	-0.3
3,788,768	-		HGI48_RS16935	0.15	-0.3
3,788,768	-		HGI48_RS16935	0.15	-0.5
3,788,768	-		HGI48_RS16935	0.15	-1.1
3,788,768	-		HGI48_RS16935	0.15	-1.5
3,788,768	-		HGI48_RS16935	0.15	-0.5
3,788,784	+				+0.5
3,788,784	+		HGI48_RS16935	0.17	+0.9
3,788,785	-		HGI48_RS16935	0.18	-0.0
3,788,785	-		HGI48_RS16935	0.18	+0.3
3,788,785	-		HGI48_RS16935	0.18	-1.5
3,788,785	-				+1.8
3,788,786	+				+0.5
3,788,786	+		HGI48_RS16935	0.18	-0.4
3,788,786	+		HGI48_RS16935	0.18	-0.3
3,788,963	+		HGI48_RS16935	0.43	-0.9
3,789,014	-		HGI48_RS16935	0.50	+0.1
3,789,141	-		HGI48_RS16935	0.68	-1.1
3,789,151	-		HGI48_RS16935	0.69	-0.9
3,789,285	+		HGI48_RS16935	0.88	+0.7
3,789,286	-		HGI48_RS16935	0.88	+0.6
3,789,308	+				+0.1
3,789,309	-				-0.5
3,789,329	-				-0.5
3,789,329	-				-2.4
3,789,347	+				-1.1
3,789,347	+				-0.2
3,789,348	-				-2.1
3,789,348	-				-0.2
3,789,376	-				-2.9
3,789,376	-				-0.0
3,789,376	-				+0.8
3,789,453	+				-0.4
3,789,453	+				+0.5
3,789,453	+				+0.7
3,789,453	+				-0.7
3,789,453	+				+0.5
3,789,453	+				-0.4
3,789,453	+				-1.1