Strain Fitness in Dickeya dianthicola 67-19 around HGI48_RS16195

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
3,632,259	-				+0.8
3,632,259	-				+1.8
3,632,495	+		HGI48_RS16190	0.34	-1.9
3,632,513	+		HGI48_RS16190	0.36	+0.9
3,632,514	-		HGI48_RS16190	0.36	-0.7
3,632,514	-		HGI48_RS16190	0.36	-1.9
3,632,514	-				+1.7
3,632,515	+		HGI48_RS16190	0.36	-0.4
3,632,516	-		HGI48_RS16190	0.37	-3.5
3,632,516	-		HGI48_RS16190	0.37	+0.4
3,632,556	+		HGI48_RS16190	0.42	+0.4
3,632,556	+				+0.4
3,632,556	+		HGI48_RS16190	0.42	-0.9
3,632,557	-		HGI48_RS16190	0.42	+0.5
3,632,557	-		HGI48_RS16190	0.42	-1.2
3,632,557	-		HGI48_RS16190	0.42	-0.0
3,632,569	-		HGI48_RS16190	0.43	-0.0
3,632,569	-		HGI48_RS16190	0.43	-0.6
3,632,576	+		HGI48_RS16190	0.44	-0.2
3,632,590	+		HGI48_RS16190	0.46	-0.6
3,632,590	+		HGI48_RS16190	0.46	-0.2
3,632,590	+		HGI48_RS16190	0.46	-2.1
3,632,591	-		HGI48_RS16190	0.46	+0.3
3,632,591	-		HGI48_RS16190	0.46	-0.3
3,632,598	-		HGI48_RS16190	0.47	-0.4
3,632,656	+		HGI48_RS16190	0.54	-0.9
3,632,656	+		HGI48_RS16190	0.54	+0.4
3,632,656	+		HGI48_RS16190	0.54	-0.4
3,632,656	+		HGI48_RS16190	0.54	+0.6
3,632,656	+				-1.2
3,632,657	-		HGI48_RS16190	0.54	+0.6
3,632,657	-		HGI48_RS16190	0.54	-0.3
3,632,657	-		HGI48_RS16190	0.54	-0.9
3,632,661	-				+0.4
3,632,661	-		HGI48_RS16190	0.55	+0.9
3,632,661	-		HGI48_RS16190	0.55	-0.6
3,632,661	-		HGI48_RS16190	0.55	+0.2
3,632,661	-		HGI48_RS16190	0.55	-1.2
3,632,741	-		HGI48_RS16190	0.65	-1.1
3,632,747	+				+0.4
3,632,747	+		HGI48_RS16190	0.66	+0.4
3,632,748	-		HGI48_RS16190	0.66	+0.8
3,632,748	-		HGI48_RS16190	0.66	-0.9
3,632,865	-				+0.8
3,632,865	-		HGI48_RS16190	0.81	+0.6
3,632,876	+		HGI48_RS16190	0.82	-0.3
3,632,939	-				-2.4
3,632,939	-				+0.6
3,632,939	-				-1.8
3,632,939	-				+0.0
3,632,963	+				-1.6
3,633,001	+				-0.0
3,633,030	+				-2.2
3,633,031	-				+0.6
3,633,031	-				-2.2
3,633,033	-				+0.4
3,633,033	-				-0.5
3,633,047	+				-0.6
3,633,054	+				-0.6
3,633,056	+				+0.9
3,633,056	+				+0.7
3,633,066	-				-0.8
3,633,085	+				+0.3
3,633,085	+				-0.1
3,633,086	-				-0.9
3,633,087	+				-1.2
3,633,088	-				-1.9
3,633,088	-				-1.0
3,633,088	-				-1.0
3,633,088	-				+0.2
3,633,088	-				+1.0
3,633,124	+				-0.3
3,633,125	-				-1.2
3,633,144	-				-0.2
3,633,165	+				-1.6
3,633,165	+				-0.6
3,633,165	+				-0.1
3,633,165	+				-0.6
3,633,165	+				+0.4
3,633,165	+				-0.8
3,633,166	-				-0.4
3,633,169	+				-1.6
3,633,169	+				+0.4
3,633,169	+				-0.9
3,633,169	+				-0.6
3,633,169	+				+1.0
3,633,169	+				-1.6
3,633,169	+				-0.2
3,633,169	+				-0.9
3,633,169	+				-0.4
3,633,170	-				-2.2
3,633,181	+				+0.4
3,633,202	-				+0.2
3,633,205	-				+0.1
3,633,225	+				+0.2
3,633,241	+				-0.3
3,633,241	+				-0.4
3,633,241	+				+0.0
3,633,242	-				-0.1
3,633,242	-				-0.9
3,633,242	-				-1.5
3,633,244	-				-0.2
3,633,244	-				+0.4
3,633,376	-				-1.0
3,633,432	-		HGI48_RS16200	0.35	+1.1