Strain Fitness in Dickeya dianthicola 67-19 around HGI48_RS15615

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
3,510,059	-				+0.4
3,510,153	+		HGI48_RS15610	0.43	-2.8
3,510,154	-		HGI48_RS15610	0.43	-0.6
3,510,154	-		HGI48_RS15610	0.43	+1.0
3,510,209	+		HGI48_RS15610	0.48	-1.5
3,510,210	-		HGI48_RS15610	0.48	-0.1
3,510,349	+		HGI48_RS15610	0.58	-0.7
3,510,351	+		HGI48_RS15610	0.59	+0.6
3,510,351	+		HGI48_RS15610	0.59	-0.4
3,510,351	+		HGI48_RS15610	0.59	-0.5
3,510,351	+		HGI48_RS15610	0.59	-0.8
3,510,352	-		HGI48_RS15610	0.59	+0.9
3,510,352	-				-0.2
3,510,352	-		HGI48_RS15610	0.59	-0.9
3,510,352	-		HGI48_RS15610	0.59	-2.5
3,510,414	+		HGI48_RS15610	0.64	-0.2
3,510,414	+		HGI48_RS15610	0.64	-0.5
3,510,414	+		HGI48_RS15610	0.64	-0.2
3,510,414	+		HGI48_RS15610	0.64	-1.6
3,510,445	+		HGI48_RS15610	0.66	-2.2
3,510,454	-		HGI48_RS15610	0.67	+0.3
3,510,572	+		HGI48_RS15610	0.76	-0.6
3,510,715	+		HGI48_RS15610	0.87	-1.2
3,510,715	+		HGI48_RS15610	0.87	-0.5
3,510,716	-		HGI48_RS15610	0.87	-0.9
3,510,716	-		HGI48_RS15610	0.87	+0.4
3,510,790	+				-2.0
3,510,790	+				-1.5
3,510,790	+				-0.4
3,510,791	-				-1.5
3,510,791	-				-0.4
3,510,887	-				-0.2
3,510,892	+				-0.3
3,510,892	+				+0.0
3,510,892	+				-0.2
3,510,892	+				+0.4
3,510,892	+				-0.5
3,510,893	-				-0.2
3,510,893	-				-2.0
3,510,893	-				+0.4
3,510,893	-				-0.6
3,510,913	-				-2.2
3,510,925	+				+0.1
3,510,937	-				-0.5
3,510,937	-				-1.2
3,511,089	+				-0.6
3,511,123	+		HGI48_RS15615	0.69	+0.6
3,511,123	+		HGI48_RS15615	0.69	-0.3
3,511,124	-		HGI48_RS15615	0.70	-1.2
3,511,139	-		HGI48_RS15615	0.77	-1.0
3,511,139	-		HGI48_RS15615	0.77	-0.6
3,511,185	-				-0.5
3,511,190	-				+0.9
3,511,535	-				+1.1
3,511,620	+				+0.4