Strain Fitness in Dickeya dianthicola 67-19 around HGI48_RS15355

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
3,456,055	+		HGI48_RS15350	0.72	+1.1
3,456,055	+		HGI48_RS15350	0.72	+0.3
3,456,055	+		HGI48_RS15350	0.72	-2.8
3,456,056	-		HGI48_RS15350	0.72	-2.5
3,456,056	-		HGI48_RS15350	0.72	+0.1
3,456,085	+		HGI48_RS15350	0.73	-0.0
3,456,112	-		HGI48_RS15350	0.74	-0.7
3,456,316	-		HGI48_RS15350	0.81	+0.6
3,456,409	+		HGI48_RS15350	0.84	+0.3
3,456,409	+				+1.9
3,456,410	-		HGI48_RS15350	0.84	+0.3
3,456,410	-		HGI48_RS15350	0.84	-1.0
3,456,410	-		HGI48_RS15350	0.84	-1.9
3,456,410	-		HGI48_RS15350	0.84	-1.7
3,456,410	-				+0.3
3,456,430	+		HGI48_RS15350	0.84	-0.7
3,456,430	+		HGI48_RS15350	0.84	-1.0
3,456,430	+		HGI48_RS15350	0.84	-0.5
3,456,430	+		HGI48_RS15350	0.84	-1.0
3,456,431	-		HGI48_RS15350	0.84	-0.2
3,456,431	-		HGI48_RS15350	0.84	-0.1
3,456,792	-				-1.2
3,456,814	+				+0.1
3,456,814	+				-0.7
3,456,815	-				-0.3
3,456,815	-				+0.6
3,456,832	+				-0.4
3,456,832	+				-0.4
3,456,832	+				+0.1
3,456,891	+				+2.8
3,456,892	-				-0.7
3,456,924	+				+1.0
3,456,925	-				-0.3
3,456,931	-				+0.6
3,456,931	-				+1.5
3,456,931	-				+1.7
3,456,931	-				+0.2
3,456,931	-				-0.7
3,456,933	+				-0.9
3,456,934	-				-0.5
3,456,975	-				+0.6
3,456,986	+				+0.5
3,456,986	+				-0.9
3,456,986	+				-0.7
3,457,057	-				+0.9
3,457,134	+				-2.3
3,457,134	+				+0.5
3,457,135	-				-0.8
3,457,156	+		HGI48_RS15355	0.11	+0.6
3,457,156	+		HGI48_RS15355	0.11	-0.7
3,457,156	+				-0.3
3,457,156	+		HGI48_RS15355	0.11	-0.3
3,457,157	-		HGI48_RS15355	0.11	-0.7
3,457,157	-		HGI48_RS15355	0.11	+0.3
3,457,157	-		HGI48_RS15355	0.11	-0.3
3,457,224	+				+1.3
3,457,390	+		HGI48_RS15355	0.28	-0.5
3,457,390	+		HGI48_RS15355	0.28	+0.2
3,457,391	-				+0.3
3,457,474	+		HGI48_RS15355	0.34	-0.7
3,457,474	+		HGI48_RS15355	0.34	-0.7
3,457,475	-		HGI48_RS15355	0.34	+0.6
3,457,785	+		HGI48_RS15355	0.56	-1.1
3,457,785	+		HGI48_RS15355	0.56	-1.1
3,457,786	-		HGI48_RS15355	0.56	+0.1
3,457,786	-		HGI48_RS15355	0.56	+0.7
3,458,069	+		HGI48_RS15355	0.76	-0.1
3,458,073	-		HGI48_RS15355	0.77	+0.0
3,458,073	-		HGI48_RS15355	0.77	-0.9
3,458,073	-		HGI48_RS15355	0.77	-0.1
3,458,296	+				-1.8
3,458,297	-				+0.3
3,458,302	+				+0.9
3,458,302	+				-0.2
3,458,302	+				+0.5
3,458,303	-				-0.7
3,458,303	-				-0.7
3,458,303	-				+0.5
3,458,303	-				+0.1
3,458,303	-				+0.1
3,458,523	+				-0.4
3,458,524	-				+1.7
3,458,584	-		HGI48_RS15360	0.13	-0.1
3,458,619	-		HGI48_RS15360	0.15	+0.5
3,459,059	+		HGI48_RS15360	0.48	-1.5
3,459,059	+		HGI48_RS15360	0.48	-0.1
3,459,110	+		HGI48_RS15360	0.52	+0.6
3,459,111	-		HGI48_RS15360	0.52	+0.7
3,459,272	-		HGI48_RS15360	0.64	+0.3