Strain Fitness in Dickeya dianthicola 67-19 around HGI48_RS15220

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
3,424,374	-				+0.9
3,424,385	+		HGI48_RS15215	0.41	-0.2
3,424,385	+		HGI48_RS15215	0.41	-0.8
3,424,386	-		HGI48_RS15215	0.41	+0.3
3,424,386	-		HGI48_RS15215	0.41	-0.1
3,424,522	+		HGI48_RS15215	0.49	+1.1
3,424,875	+		HGI48_RS15215	0.71	-2.3
3,424,875	+		HGI48_RS15215	0.71	-0.7
3,424,875	+		HGI48_RS15215	0.71	+0.0
3,424,875	+		HGI48_RS15215	0.71	+1.0
3,424,875	+		HGI48_RS15215	0.71	-1.0
3,424,876	-		HGI48_RS15215	0.71	-2.0
3,424,952	+		HGI48_RS15215	0.75	-1.3
3,425,051	+		HGI48_RS15215	0.81	-0.4
3,425,073	+		HGI48_RS15215	0.83	-2.3
3,425,074	-		HGI48_RS15215	0.83	+0.1
3,425,147	+		HGI48_RS15215	0.87	-0.7
3,425,148	-		HGI48_RS15215	0.87	-0.1
3,425,148	-		HGI48_RS15215	0.87	+0.3
3,425,237	+				+0.3
3,425,269	+				+0.0
3,425,270	-				+0.0
3,425,298	+				-1.1
3,425,432	+				-0.3
3,425,433	-				-0.2
3,425,535	+				-0.1
3,425,536	-				-0.2
3,425,589	+		HGI48_RS15220	0.11	+0.3
3,425,590	-		HGI48_RS15220	0.11	-1.6
3,425,590	-		HGI48_RS15220	0.11	-0.7
3,425,590	-		HGI48_RS15220	0.11	-1.4
3,425,590	-		HGI48_RS15220	0.11	+0.0
3,425,590	-		HGI48_RS15220	0.11	-1.0
3,425,590	-		HGI48_RS15220	0.11	-0.1
3,425,816	+		HGI48_RS15220	0.22	-0.1
3,425,819	+		HGI48_RS15220	0.22	-0.6
3,425,820	-		HGI48_RS15220	0.22	+0.7
3,425,820	-		HGI48_RS15220	0.22	-0.3
3,425,940	+		HGI48_RS15220	0.27	-0.5
3,425,961	+		HGI48_RS15220	0.28	-0.4
3,426,061	+		HGI48_RS15220	0.33	-0.2
3,426,176	+		HGI48_RS15220	0.38	-2.0
3,426,190	+		HGI48_RS15220	0.39	-0.7
3,426,292	+		HGI48_RS15220	0.44	+0.0
3,426,293	-		HGI48_RS15220	0.44	+0.0
3,426,293	-		HGI48_RS15220	0.44	+0.3
3,426,293	-				+0.9
3,426,325	+		HGI48_RS15220	0.45	-0.3
3,426,325	+		HGI48_RS15220	0.45	-0.7
3,426,325	+		HGI48_RS15220	0.45	-1.8
3,426,325	+				+2.9
3,426,325	+		HGI48_RS15220	0.45	+0.2
3,426,325	+		HGI48_RS15220	0.45	+0.1
3,426,325	+		HGI48_RS15220	0.45	-2.0
3,426,325	+		HGI48_RS15220	0.45	-2.2
3,426,326	-		HGI48_RS15220	0.45	+0.2
3,426,326	-		HGI48_RS15220	0.45	+0.0
3,426,326	-		HGI48_RS15220	0.45	-1.0
3,426,349	+		HGI48_RS15220	0.46	-0.2
3,426,392	-		HGI48_RS15220	0.48	+0.3
3,426,733	-		HGI48_RS15220	0.64	-0.3
3,426,830	+		HGI48_RS15220	0.69	+0.5
3,426,830	+		HGI48_RS15220	0.69	-0.4
3,426,831	-		HGI48_RS15220	0.69	-0.9
3,426,831	-		HGI48_RS15220	0.69	+0.8
3,426,831	-		HGI48_RS15220	0.69	-3.0
3,426,832	+		HGI48_RS15220	0.69	+0.1
3,426,832	+		HGI48_RS15220	0.69	-0.1
3,426,832	+		HGI48_RS15220	0.69	-0.2
3,426,832	+		HGI48_RS15220	0.69	-0.1
3,426,833	-		HGI48_RS15220	0.69	-2.5
3,426,833	-				-0.3
3,426,833	-		HGI48_RS15220	0.69	-0.6
3,427,101	+		HGI48_RS15220	0.81	-0.2
3,427,206	-		HGI48_RS15220	0.86	+0.6
3,427,375	+				+0.3
3,427,375	+				+0.3
3,427,375	+				+0.2
3,427,375	+				-1.0
3,427,375	+				-0.7
3,427,375	+				-0.7
3,427,375	+				-0.0
3,427,376	-				-1.3
3,427,376	-				-0.8
3,427,376	-				-1.0
3,427,376	-				-1.0
3,427,376	-				-0.0
3,427,376	-				-0.5
3,427,380	+				-1.0
3,427,380	+				+0.3
3,427,380	+				-0.5
3,427,380	+				-1.9
3,427,380	+				-0.7
3,427,380	+				-0.6
3,427,381	-				-0.3
3,427,381	-				-2.0
3,427,381	-				-0.5
3,427,381	-				-1.3
3,427,384	+				+0.5
3,427,385	-				-1.0
3,427,488	+				-1.3
3,427,489	-				+0.3
3,427,575	+				-0.3
3,427,601	+				-0.9
3,427,601	+				-0.3
3,427,601	+				+0.0
3,427,601	+				-0.4
3,427,601	+				-0.4
3,427,601	+				-0.8
3,427,601	+				+0.9
3,427,601	+				-0.0
3,427,601	+				-1.1
3,427,601	+				+1.3
3,427,601	+				-1.4
3,427,601	+				-0.1
3,427,601	+				-2.0
3,427,601	+				-2.3
3,427,601	+				-0.9
3,427,602	-				-1.3
3,427,602	-				+0.3
3,427,602	-				-0.3
3,427,602	-				+0.3
3,427,602	-				-0.7
3,427,602	-				+0.6
3,427,602	-				-1.3
3,427,602	-				-1.1
3,427,602	-				-0.3
3,427,602	-				+0.0
3,427,602	-				+1.0
3,427,602	-				-0.7
3,427,602	-				-0.8
3,427,602	-				+0.1
3,427,620	+				+0.9
3,427,623	+				-0.1
3,427,634	+				-1.0
3,427,634	+				-1.1
3,427,634	+				-0.8
3,427,635	-				+0.7
3,427,659	-				-2.3
3,427,659	-				-0.7
3,427,686	+				+0.0
3,427,686	+				-0.3
3,427,687	-				-0.3
3,427,691	-				-0.4
3,427,691	-				+1.0
3,427,691	-				-0.8
3,427,693	+				+0.2
3,427,694	-				-0.1
3,427,697	+				+0.3
3,427,697	+				-0.3
3,427,697	+				+0.1
3,427,698	-				-0.9
3,427,703	+				+0.3
3,427,704	-				-1.7
3,427,704	-				-0.4
3,427,713	+				-0.5
3,427,750	-				-1.3
3,427,854	+				+1.8
3,428,191	-		HGI48_RS15225	0.22	-2.3
3,428,197	-		HGI48_RS15225	0.23	-0.8
3,428,397	+		HGI48_RS15225	0.32	-1.5