Strain Fitness in Dickeya dianthicola 67-19 around HGI48_RS15210

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
3,422,091	+				-2.5
3,422,111	-				-1.1
3,422,111	-				-2.5
3,422,140	+				+1.6
3,422,213	+				+0.5
3,422,317	+		HGI48_RS15205	0.15	-0.1
3,422,317	+		HGI48_RS15205	0.15	+0.1
3,422,317	+		HGI48_RS15205	0.15	-1.0
3,422,318	-		HGI48_RS15205	0.15	-1.7
3,422,318	-		HGI48_RS15205	0.15	-0.4
3,422,401	-				+0.9
3,422,637	+		HGI48_RS15205	0.87	-2.0
3,422,694	-				-2.3
3,422,701	+				-1.0
3,422,701	+				+0.1
3,422,701	+				-0.9
3,422,702	-				+0.0
3,422,716	+				-3.3
3,422,717	-				-0.5
3,422,717	-				-1.3
3,422,732	+				-0.7
3,422,732	+				-0.7
3,422,896	+				-0.4
3,422,896	+				+1.3
3,422,897	-				-1.4
3,422,897	-				-3.0
3,422,897	-				+0.1
3,422,897	-				-0.5
3,422,897	-				-0.4
3,422,897	-				-0.8
3,422,898	+				+2.7
3,422,898	+				-0.1
3,422,898	+				+0.3
3,422,899	-				-0.7
3,422,950	+				-0.9
3,422,952	+				-0.1
3,422,953	-				-0.1
3,422,953	-				-0.2
3,422,953	-				-0.3
3,422,953	-				+0.8
3,422,978	-		HGI48_RS15210	0.12	+0.0
3,422,978	-		HGI48_RS15210	0.12	-0.6
3,422,988	+		HGI48_RS15210	0.14	+1.5
3,422,989	-				-1.3
3,423,017	-		HGI48_RS15210	0.17	-1.5
3,423,017	-		HGI48_RS15210	0.17	-0.7
3,423,017	-		HGI48_RS15210	0.17	-0.1
3,423,017	-		HGI48_RS15210	0.17	-0.2
3,423,017	-		HGI48_RS15210	0.17	+1.1
3,423,221	+		HGI48_RS15210	0.42	-2.0
3,423,221	+				-0.3
3,423,221	+		HGI48_RS15210	0.42	+0.5
3,423,222	-		HGI48_RS15210	0.42	-0.7
3,423,222	-		HGI48_RS15210	0.42	+0.3
3,423,327	+		HGI48_RS15210	0.55	-0.6
3,423,421	+		HGI48_RS15210	0.67	+0.3
3,423,421	+		HGI48_RS15210	0.67	+0.3
3,423,422	-		HGI48_RS15210	0.67	+0.3
3,423,422	-		HGI48_RS15210	0.67	-0.4
3,423,422	-		HGI48_RS15210	0.67	-1.0
3,423,422	-		HGI48_RS15210	0.67	-1.7
3,423,422	-		HGI48_RS15210	0.67	+0.5
3,423,563	+		HGI48_RS15210	0.84	-0.3
3,423,563	+		HGI48_RS15210	0.84	-1.4
3,423,564	-		HGI48_RS15210	0.84	-1.7
3,423,594	+		HGI48_RS15210	0.88	+0.3
3,423,595	-		HGI48_RS15210	0.88	-0.6
3,423,595	-		HGI48_RS15210	0.88	+0.3
3,423,679	+				+1.0
3,423,680	-				-0.9
3,423,696	-				+0.2
3,423,696	-				-0.7
3,423,812	+				+0.1
3,423,813	-				-0.1
3,423,813	-				+1.0
3,423,813	-				-1.5
3,423,863	+				-2.7
3,423,918	+		HGI48_RS15215	0.13	-0.8
3,423,919	-		HGI48_RS15215	0.13	+1.5
3,424,116	+		HGI48_RS15215	0.25	+0.0
3,424,144	+		HGI48_RS15215	0.26	-2.0
3,424,144	+		HGI48_RS15215	0.26	+0.6
3,424,145	-		HGI48_RS15215	0.26	-0.4
3,424,145	-		HGI48_RS15215	0.26	+0.0
3,424,145	-		HGI48_RS15215	0.26	+0.5
3,424,235	+		HGI48_RS15215	0.32	-1.1
3,424,268	+		HGI48_RS15215	0.34	-0.8
3,424,268	+				+0.3
3,424,268	+				-0.3
3,424,268	+		HGI48_RS15215	0.34	-0.2
3,424,268	+		HGI48_RS15215	0.34	+0.7
3,424,269	-		HGI48_RS15215	0.34	-0.7
3,424,269	-		HGI48_RS15215	0.34	+0.3
3,424,374	-				+0.9
3,424,385	+		HGI48_RS15215	0.41	-0.2
3,424,385	+		HGI48_RS15215	0.41	-0.8
3,424,386	-		HGI48_RS15215	0.41	+0.3
3,424,386	-		HGI48_RS15215	0.41	-0.1
3,424,522	+		HGI48_RS15215	0.49	+1.1