Strain Fitness in Dickeya dianthicola 67-19 around HGI48_RS14705

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
3,309,254	+				-0.2
3,309,255	-				+0.9
3,309,255	-				+0.9
3,309,379	-		HGI48_RS14700	0.20	-1.0
3,309,415	+		HGI48_RS14700	0.23	-0.3
3,309,415	+		HGI48_RS14700	0.23	-0.2
3,309,415	+		HGI48_RS14700	0.23	-3.7
3,309,416	-		HGI48_RS14700	0.23	-2.2
3,309,536	+		HGI48_RS14700	0.35	-1.4
3,309,536	+		HGI48_RS14700	0.35	+0.1
3,309,536	+		HGI48_RS14700	0.35	+0.1
3,309,536	+		HGI48_RS14700	0.35	-0.9
3,309,536	+		HGI48_RS14700	0.35	-2.5
3,309,536	+		HGI48_RS14700	0.35	+0.8
3,309,536	+				-1.3
3,309,536	+				+1.0
3,309,537	-		HGI48_RS14700	0.35	-1.0
3,309,537	-		HGI48_RS14700	0.35	-2.3
3,309,537	-		HGI48_RS14700	0.35	-1.7
3,309,537	-		HGI48_RS14700	0.35	-0.9
3,309,537	-		HGI48_RS14700	0.35	-2.0
3,309,537	-		HGI48_RS14700	0.35	-0.7
3,309,545	-		HGI48_RS14700	0.36	-0.7
3,309,606	+		HGI48_RS14700	0.41	-0.9
3,309,607	-		HGI48_RS14700	0.42	-0.1
3,309,635	+		HGI48_RS14700	0.44	-1.2
3,309,635	+		HGI48_RS14700	0.44	-0.2
3,309,635	+		HGI48_RS14700	0.44	-0.4
3,309,635	+				+0.3
3,309,635	+		HGI48_RS14700	0.44	-2.0
3,309,635	+		HGI48_RS14700	0.44	-2.0
3,309,635	+		HGI48_RS14700	0.44	+0.5
3,309,636	-		HGI48_RS14700	0.44	-1.0
3,309,636	-				-0.3
3,309,636	-		HGI48_RS14700	0.44	-0.8
3,309,636	-		HGI48_RS14700	0.44	-2.3
3,309,636	-		HGI48_RS14700	0.44	+0.5
3,309,636	-				+1.5
3,309,636	-				+0.3
3,309,707	-		HGI48_RS14700	0.51	-0.8
3,309,708	+		HGI48_RS14700	0.51	-0.1
3,309,708	+		HGI48_RS14700	0.51	-1.4
3,309,708	+		HGI48_RS14700	0.51	-0.0
3,309,709	-		HGI48_RS14700	0.51	+0.3
3,309,773	+		HGI48_RS14700	0.57	-1.3
3,309,773	+		HGI48_RS14700	0.57	-0.7
3,309,850	-		HGI48_RS14700	0.65	-1.0
3,309,850	-		HGI48_RS14700	0.65	-0.5
3,310,002	+		HGI48_RS14700	0.79	+0.8
3,310,002	+		HGI48_RS14700	0.79	-0.5
3,310,003	-		HGI48_RS14700	0.79	-1.5
3,310,003	-				+2.3
3,310,036	+		HGI48_RS14700	0.83	+1.0
3,310,070	+		HGI48_RS14700	0.86	+0.6
3,310,070	+		HGI48_RS14700	0.86	-1.7
3,310,096	+		HGI48_RS14700	0.88	-1.1
3,310,097	-		HGI48_RS14700	0.88	-1.7
3,310,097	-		HGI48_RS14700	0.88	-0.2
3,310,097	-				-0.3
3,310,140	+				-0.2
3,310,370	-		HGI48_RS14705	0.21	-0.2
3,310,398	+		HGI48_RS14705	0.25	-0.7
3,310,436	+		HGI48_RS14705	0.30	+0.8
3,310,503	+		HGI48_RS14705	0.39	+0.5
3,310,503	+		HGI48_RS14705	0.39	-3.0
3,310,503	+		HGI48_RS14705	0.39	-0.7
3,310,504	-		HGI48_RS14705	0.39	-1.9
3,310,536	+		HGI48_RS14705	0.43	-0.4
3,310,537	-		HGI48_RS14705	0.43	-1.7
3,310,577	-		HGI48_RS14705	0.49	-0.8
3,310,577	-		HGI48_RS14705	0.49	+1.4
3,310,643	+		HGI48_RS14705	0.58	+0.5
3,310,643	+		HGI48_RS14705	0.58	-1.0
3,310,643	+		HGI48_RS14705	0.58	-1.7
3,310,647	-		HGI48_RS14705	0.58	-2.7
3,310,677	-				+1.9
3,310,704	+		HGI48_RS14705	0.66	+1.2
3,310,704	+				+1.6
3,310,704	+		HGI48_RS14705	0.66	+0.6
3,310,704	+		HGI48_RS14705	0.66	-0.2
3,310,705	-		HGI48_RS14705	0.66	-0.4
3,310,705	-				-0.7
3,310,705	-		HGI48_RS14705	0.66	-2.9
3,310,705	-		HGI48_RS14705	0.66	-0.6
3,310,705	-		HGI48_RS14705	0.66	-0.3
3,310,827	-		HGI48_RS14705	0.83	-0.1
3,310,932	-				-0.5
3,310,932	-				+0.7
3,310,932	-				-0.4
3,310,984	-				-0.8
3,311,043	-		HGI48_RS14710	0.24	-0.4
3,311,043	-		HGI48_RS14710	0.24	-1.1
3,311,084	-		HGI48_RS14710	0.35	+0.1
3,311,084	-		HGI48_RS14710	0.35	-1.4
3,311,114	-		HGI48_RS14710	0.43	-1.1
3,311,114	-		HGI48_RS14710	0.43	+1.0
3,311,371	+				+0.3
3,311,371	+				+1.1
3,311,372	-				-0.1
3,311,375	-				+0.2
3,311,518	+		HGI48_RS14715	0.34	-0.4
3,311,518	+		HGI48_RS14715	0.34	-0.0
3,311,595	+		HGI48_RS14715	0.49	-1.0
3,311,595	+		HGI48_RS14715	0.49	-0.2
3,311,596	-		HGI48_RS14715	0.49	+0.2
3,311,596	-		HGI48_RS14715	0.49	-1.1
3,311,656	-		HGI48_RS14715	0.60	-0.8
3,311,679	+		HGI48_RS14715	0.64	-0.1
3,311,679	+		HGI48_RS14715	0.64	-1.3
3,311,679	+		HGI48_RS14715	0.64	-0.3
3,311,679	+		HGI48_RS14715	0.64	+0.1
3,311,679	+		HGI48_RS14715	0.64	-0.7
3,311,679	+		HGI48_RS14715	0.64	+0.3
3,311,680	-		HGI48_RS14715	0.64	-1.3
3,311,680	-		HGI48_RS14715	0.64	-2.3
3,311,680	-		HGI48_RS14715	0.64	-1.5
3,311,680	-		HGI48_RS14715	0.64	-1.3
3,311,692	+		HGI48_RS14715	0.66	-0.4
3,311,692	+		HGI48_RS14715	0.66	+0.3
3,311,693	-		HGI48_RS14715	0.67	+0.5
3,311,693	-		HGI48_RS14715	0.67	-0.7
3,311,693	-		HGI48_RS14715	0.67	-0.4
3,311,693	-				+0.7
3,311,724	+		HGI48_RS14715	0.72	-2.0
3,311,854	+				-1.0
3,311,854	+				+0.6
3,311,854	+				-0.2
3,311,854	+				+0.6
3,311,855	-				+0.3
3,311,895	+				-1.3
3,311,898	+				+0.3
3,311,899	-				-0.5
3,311,899	-				+0.6