Strain Fitness in Dickeya dianthicola 67-19 around HGI48_RS14020

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
3,135,071	+		HGI48_RS14015	0.57	-0.3
3,135,071	+		HGI48_RS14015	0.57	-0.6
3,135,095	+		HGI48_RS14015	0.61	-0.2
3,135,096	-		HGI48_RS14015	0.61	-1.6
3,135,096	-				+2.4
3,135,140	-		HGI48_RS14015	0.69	+0.4
3,135,372	+				-2.1
3,135,372	+				+0.1
3,135,373	-				+1.2
3,135,375	+				-0.3
3,135,401	+				-2.1
3,135,401	+				-0.9
3,135,402	-				+0.2
3,135,402	-				+0.5
3,135,402	-				+0.7
3,135,402	-				+0.8
3,135,407	+				+1.2
3,135,408	-				-2.1
3,135,561	+				-0.1
3,135,713	+				+0.9
3,135,715	+				-0.8
3,135,715	+				-2.1
3,135,715	+				-1.1
3,135,716	-				-0.8
3,135,716	-				-0.2
3,135,716	-				+0.7
3,135,716	-				+0.9
3,135,717	+				-1.3
3,135,717	+				+1.2
3,135,717	+				-0.9
3,135,717	+				+0.8
3,135,717	+				+0.2
3,135,717	+				-0.2
3,135,717	+				+0.4
3,135,717	+				-0.4
3,135,717	+				-0.5
3,135,718	-				+1.6
3,135,718	-				-0.4
3,135,718	-				-1.3
3,135,718	-				-0.9
3,135,718	-				+0.9
3,135,718	-				-1.3
3,135,718	-				+0.8
3,135,718	-				-2.6
3,135,718	-				+0.2
3,135,718	-				-0.1
3,135,718	-				-0.5
3,135,719	+				-1.3
3,135,719	+				+1.2
3,135,720	-				+0.2
3,135,720	-				-2.9
3,135,720	-				-0.4
3,135,720	-				-1.5
3,135,720	-				-0.3
3,135,720	-				+1.8
3,135,721	+				+0.7
3,135,721	+				-0.3
3,135,722	-				+0.4
3,135,724	-				-1.7
3,135,752	-				-0.1
3,135,755	-				-0.2
3,135,782	+				+0.2
3,135,783	-				-0.3
3,135,783	-				+0.8
3,135,790	+				-1.1
3,135,804	+				+0.2
3,135,804	+				-0.8
3,135,805	-				-0.3
3,135,838	+				+1.2
3,135,838	+				+1.2
3,135,839	-				-0.8
3,135,842	-				+0.5
3,135,845	-				-0.6
3,135,959	+				+0.9
3,135,959	+				-1.3
3,135,978	+				-0.2
3,135,978	+				+0.1
3,135,978	+				-0.5
3,135,979	-				-0.2
3,135,979	-				+0.0
3,135,979	-				-1.6
3,135,979	-				+0.4
3,135,990	+				+1.2
3,135,990	+				-0.2
3,135,991	-				+0.6
3,136,055	+				+0.2
3,136,056	-				+0.5
3,136,090	+				-1.8
3,136,091	-				-0.2
3,136,107	-				-0.5
3,136,141	+				-0.5
3,136,142	-				-0.8
3,136,152	+				-0.8
3,136,153	-				-2.1
3,136,191	+		HGI48_RS14020	0.11	+0.2
3,136,192	-		HGI48_RS14020	0.11	-0.3
3,136,192	-		HGI48_RS14020	0.11	-0.6
3,136,222	+		HGI48_RS14020	0.14	-1.6
3,136,227	-		HGI48_RS14020	0.14	+0.2
3,136,227	-		HGI48_RS14020	0.14	+0.2
3,136,447	-		HGI48_RS14020	0.31	-1.8
3,136,457	-		HGI48_RS14020	0.32	-0.0
3,136,457	-		HGI48_RS14020	0.32	-0.8
3,136,484	+				-1.3
3,136,512	-		HGI48_RS14020	0.36	-0.1
3,136,512	-		HGI48_RS14020	0.36	-0.8
3,136,512	-		HGI48_RS14020	0.36	+0.2
3,136,528	+		HGI48_RS14020	0.38	-2.1
3,136,528	+		HGI48_RS14020	0.38	+0.9
3,136,529	-		HGI48_RS14020	0.38	+0.8
3,136,529	-		HGI48_RS14020	0.38	-0.1
3,136,529	-		HGI48_RS14020	0.38	-1.9
3,136,572	+		HGI48_RS14020	0.41	-1.6
3,136,573	-		HGI48_RS14020	0.41	+0.3
3,136,573	-		HGI48_RS14020	0.41	-0.5
3,136,575	+		HGI48_RS14020	0.41	-0.1
3,136,575	+				-0.3
3,136,779	+		HGI48_RS14020	0.57	+0.2
3,136,907	-		HGI48_RS14020	0.67	-0.5
3,136,953	+				+1.0
3,136,953	+		HGI48_RS14020	0.71	-1.5
3,136,954	-		HGI48_RS14020	0.71	-0.8
3,136,954	-		HGI48_RS14020	0.71	+0.1
3,136,966	+		HGI48_RS14020	0.72	-0.3
3,136,989	+		HGI48_RS14020	0.74	-0.5
3,137,152	-		HGI48_RS14020	0.86	+0.0
3,137,152	-		HGI48_RS14020	0.86	+0.1
3,137,302	+				-1.0
3,137,303	-				-0.0
3,137,303	-				-2.3
3,137,303	-				+0.2
3,137,309	+				-0.2
3,137,309	+				+0.9
3,137,493	+				-0.6
3,137,502	+				+1.4
3,137,520	-				-0.5
3,137,530	+				-1.8
3,137,530	+				-0.2
3,137,530	+				-0.3
3,137,530	+				-1.0
3,137,530	+				+0.9
3,137,531	-				+0.3
3,137,531	-				-0.8
3,137,531	-				+0.2
3,137,642	-				-0.1
3,137,701	+				-0.8
3,137,702	-				-0.1
3,137,761	+		HGI48_RS14025	0.13	+0.2
3,137,761	+		HGI48_RS14025	0.13	+0.1
3,137,761	+				-0.3
3,137,809	+		HGI48_RS14025	0.16	+0.6
3,137,809	+		HGI48_RS14025	0.16	-0.0
3,137,810	-		HGI48_RS14025	0.16	+0.2
3,137,857	+		HGI48_RS14025	0.18	-1.8
3,137,857	+		HGI48_RS14025	0.18	-2.3
3,137,858	-		HGI48_RS14025	0.19	-1.3
3,137,858	-		HGI48_RS14025	0.19	-0.4
3,137,861	+		HGI48_RS14025	0.19	+0.0
3,137,861	+		HGI48_RS14025	0.19	-1.2
3,137,861	+		HGI48_RS14025	0.19	-0.6
3,137,861	+		HGI48_RS14025	0.19	+0.2
3,137,861	+		HGI48_RS14025	0.19	-1.1
3,137,861	+		HGI48_RS14025	0.19	+1.7
3,137,861	+		HGI48_RS14025	0.19	-1.3
3,137,862	-		HGI48_RS14025	0.19	+0.0
3,137,878	+		HGI48_RS14025	0.20	-0.8
3,137,879	-		HGI48_RS14025	0.20	-0.2
3,137,884	+		HGI48_RS14025	0.20	+1.2
3,137,884	+		HGI48_RS14025	0.20	+0.1
3,137,884	+				+1.2
3,137,903	+		HGI48_RS14025	0.21	-0.3
3,137,904	-		HGI48_RS14025	0.21	-0.8
3,137,904	-		HGI48_RS14025	0.21	+0.2
3,137,966	+		HGI48_RS14025	0.25	+0.7
3,138,069	+		HGI48_RS14025	0.30	-0.0
3,138,070	-				+0.7
3,138,079	+				-1.3
3,138,079	+		HGI48_RS14025	0.31	-0.1
3,138,103	+		HGI48_RS14025	0.32	-1.3
3,138,177	+		HGI48_RS14025	0.37	-0.8
3,138,177	+		HGI48_RS14025	0.37	+0.1
3,138,177	+		HGI48_RS14025	0.37	-2.1