Strain Fitness in Dickeya dianthicola 67-19 around HGI48_RS13330

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
2,919,060	+				+0.7
2,919,060	+				-1.3
2,919,061	-				+0.2
2,919,061	-				-0.8
2,919,061	-				+0.2
2,919,115	-				-1.4
2,919,115	-				+0.2
2,919,116	+				-0.8
2,919,116	+				-0.8
2,919,117	-				+0.5
2,919,117	-				-1.5
2,919,117	-				-0.5
2,919,228	+		HGI48_RS13325	0.15	-0.5
2,919,229	-		HGI48_RS13325	0.16	+0.4
2,919,229	-		HGI48_RS13325	0.16	-0.8
2,919,229	-		HGI48_RS13325	0.16	-0.5
2,919,234	+		HGI48_RS13325	0.16	-0.7
2,919,235	-		HGI48_RS13325	0.17	-0.5
2,919,235	-		HGI48_RS13325	0.17	+0.1
2,919,243	+		HGI48_RS13325	0.18	-0.5
2,919,244	-		HGI48_RS13325	0.18	-0.6
2,919,273	+				-0.4
2,919,273	+		HGI48_RS13325	0.23	-0.2
2,919,273	+		HGI48_RS13325	0.23	-1.6
2,919,274	-		HGI48_RS13325	0.23	-0.2
2,919,274	-		HGI48_RS13325	0.23	-0.5
2,919,274	-		HGI48_RS13325	0.23	-0.2
2,919,299	+		HGI48_RS13325	0.27	-1.8
2,919,374	+		HGI48_RS13325	0.38	-1.4
2,919,375	-		HGI48_RS13325	0.38	-1.6
2,919,426	+		HGI48_RS13325	0.46	+0.2
2,919,624	+		HGI48_RS13325	0.77	-0.8
2,919,625	-		HGI48_RS13325	0.78	-0.8
2,919,625	-		HGI48_RS13325	0.78	-1.0
2,919,646	+		HGI48_RS13325	0.81	-0.0
2,919,646	+		HGI48_RS13325	0.81	+1.4
2,919,705	+				+0.6
2,919,744	+				+0.1
2,919,744	+				+0.3
2,919,745	-				+0.7
2,919,745	-				-2.6
2,919,784	+				+0.8
2,919,784	+				-1.2
2,919,887	-				+0.5
2,919,899	+				-0.8
2,919,917	+				-0.0
2,919,917	+				-0.7
2,919,917	+				-0.4
2,919,917	+				-0.8
2,919,918	-				+0.1
2,919,920	+				+0.1
2,919,995	+		HGI48_RS13330	0.49	+0.2
2,920,131	+				-1.2
2,920,132	-				+0.4
2,920,205	-				+0.4
2,920,223	+				+0.7
2,920,224	-				-0.5
2,920,230	+				+0.6
2,920,341	-				+1.5
2,920,361	+				-1.2
2,920,402	-				-3.0
2,920,415	-				+0.2
2,920,415	-				+0.2
2,920,417	-				-0.8
2,920,429	+				-1.2
2,920,430	-				+0.2
2,920,497	-				-1.8
2,920,538	+				-0.5
2,920,539	-				+1.4
2,920,563	+				-1.4
2,920,588	+				-1.3
2,920,588	+				-0.1
2,920,588	+				-0.1
2,920,588	+				+0.2
2,920,707	+		HGI48_RS13335	0.14	-0.2
2,920,708	-		HGI48_RS13335	0.14	-1.2
2,920,708	-		HGI48_RS13335	0.14	-0.4
2,920,712	+				+0.2
2,920,712	+				-0.4
2,920,713	-		HGI48_RS13335	0.15	-0.5
2,920,765	+		HGI48_RS13335	0.18	+0.2
2,920,766	-		HGI48_RS13335	0.18	-0.8
2,920,767	+				+1.5
2,920,767	+		HGI48_RS13335	0.18	+0.2
2,920,767	+		HGI48_RS13335	0.18	-2.6
2,920,797	+		HGI48_RS13335	0.20	+1.2
2,920,815	+		HGI48_RS13335	0.21	+0.1
2,920,815	+		HGI48_RS13335	0.21	-0.5
2,920,816	-		HGI48_RS13335	0.21	-0.2
2,920,825	+		HGI48_RS13335	0.22	-0.3
2,920,825	+		HGI48_RS13335	0.22	-1.8
2,920,855	-				-0.8
2,920,918	+		HGI48_RS13335	0.27	-0.5
2,920,918	+		HGI48_RS13335	0.27	-0.2
2,920,918	+		HGI48_RS13335	0.27	-0.2
2,920,919	-		HGI48_RS13335	0.28	-1.2
2,920,919	-		HGI48_RS13335	0.28	+0.3
2,920,919	-				+0.2
2,920,919	-		HGI48_RS13335	0.28	+0.3
2,920,919	-		HGI48_RS13335	0.28	+1.0
2,920,919	-				+2.2
2,920,967	-		HGI48_RS13335	0.31	-1.3
2,920,972	+		HGI48_RS13335	0.31	-0.6
2,920,972	+		HGI48_RS13335	0.31	-0.8
2,920,973	-				-0.4
2,920,973	-		HGI48_RS13335	0.31	+0.1
2,920,973	-		HGI48_RS13335	0.31	-0.8
2,920,979	+		HGI48_RS13335	0.31	+0.5
2,920,980	-		HGI48_RS13335	0.31	+0.7
2,920,980	-		HGI48_RS13335	0.31	-0.4
2,920,980	-		HGI48_RS13335	0.31	-0.1
2,920,980	-		HGI48_RS13335	0.31	+0.2
2,920,980	-		HGI48_RS13335	0.31	-1.1
2,921,010	+		HGI48_RS13335	0.33	-0.3
2,921,010	+		HGI48_RS13335	0.33	-1.4
2,921,011	-		HGI48_RS13335	0.33	+0.5
2,921,011	-		HGI48_RS13335	0.33	-1.8
2,921,011	-		HGI48_RS13335	0.33	+0.5