Strain Fitness in Dickeya dianthicola 67-19 around HGI48_RS13150

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
2,879,924	+		HGI48_RS13145	0.54	-1.4
2,879,924	+		HGI48_RS13145	0.54	-0.6
2,879,953	+		HGI48_RS13145	0.56	-0.4
2,879,981	-		HGI48_RS13145	0.58	-0.8
2,879,997	+		HGI48_RS13145	0.59	-0.3
2,879,997	+		HGI48_RS13145	0.59	-2.1
2,879,997	+		HGI48_RS13145	0.59	+0.4
2,879,998	-		HGI48_RS13145	0.59	-0.3
2,879,998	-		HGI48_RS13145	0.59	-0.2
2,879,998	-				+1.5
2,879,998	-		HGI48_RS13145	0.59	-1.5
2,880,002	-		HGI48_RS13145	0.59	-0.6
2,880,162	+		HGI48_RS13145	0.70	-1.1
2,880,201	+				+0.2
2,880,201	+		HGI48_RS13145	0.73	+0.2
2,880,201	+		HGI48_RS13145	0.73	-2.4
2,880,283	+		HGI48_RS13145	0.79	-1.0
2,880,283	+		HGI48_RS13145	0.79	-0.7
2,880,284	-				+0.9
2,880,284	-		HGI48_RS13145	0.79	-1.8
2,880,325	+		HGI48_RS13145	0.82	+0.2
2,880,325	+		HGI48_RS13145	0.82	+0.5
2,880,325	+		HGI48_RS13145	0.82	+0.2
2,880,478	+				-1.1
2,880,478	+				-1.8
2,880,550	+				+1.2
2,880,589	+				-0.8
2,880,589	+				-1.0
2,880,589	+				-0.3
2,880,589	+				-0.5
2,880,589	+				-0.8
2,880,592	+				+0.9
2,880,592	+				+0.2
2,880,593	-				-0.1
2,880,593	-				+0.2
2,880,593	-				-1.0
2,880,593	-				+0.8
2,880,593	-				+0.2
2,880,593	-				-0.8
2,880,609	+				-1.0
2,880,612	+				+0.9
2,880,612	+				+1.8
2,880,612	+				-0.2
2,880,613	-				+1.0
2,880,621	+				+0.6
2,880,679	+				+1.0
2,880,679	+				-1.1
2,880,789	-				-1.0
2,880,800	+				-1.1
2,880,801	-				+0.4
2,880,865	+				-2.0
2,881,004	-		HGI48_RS13150	0.12	-0.3
2,881,014	-		HGI48_RS13150	0.13	+0.5
2,881,182	+		HGI48_RS13150	0.35	-1.5
2,881,183	-		HGI48_RS13150	0.35	-1.4
2,881,183	-		HGI48_RS13150	0.35	-0.7
2,881,183	-		HGI48_RS13150	0.35	-0.1
2,881,184	+		HGI48_RS13150	0.35	-0.8
2,881,184	+		HGI48_RS13150	0.35	-0.5
2,881,184	+		HGI48_RS13150	0.35	+0.3
2,881,184	+		HGI48_RS13150	0.35	-0.4
2,881,184	+		HGI48_RS13150	0.35	-0.3
2,881,184	+		HGI48_RS13150	0.35	+0.5
2,881,184	+		HGI48_RS13150	0.35	-1.7
2,881,185	-		HGI48_RS13150	0.35	-0.8
2,881,290	+				-1.4
2,881,291	-				+2.5
2,881,291	-		HGI48_RS13150	0.48	+0.2
2,881,330	-				-0.8
2,881,330	-		HGI48_RS13150	0.53	+0.0
2,881,330	-		HGI48_RS13150	0.53	-0.4
2,881,400	+		HGI48_RS13150	0.62	-0.0
2,881,403	+		HGI48_RS13150	0.62	+0.6
2,881,403	+		HGI48_RS13150	0.62	+0.5
2,881,403	+		HGI48_RS13150	0.62	+0.0
2,881,403	+				-1.4
2,881,404	-		HGI48_RS13150	0.63	+1.2
2,881,404	-		HGI48_RS13150	0.63	+1.2
2,881,404	-				+1.2
2,881,404	-		HGI48_RS13150	0.63	-0.1
2,881,404	-		HGI48_RS13150	0.63	-1.8
2,881,404	-		HGI48_RS13150	0.63	-2.8
2,881,406	+		HGI48_RS13150	0.63	+0.2
2,881,406	+		HGI48_RS13150	0.63	-0.1
2,881,406	+		HGI48_RS13150	0.63	+0.2
2,881,407	-		HGI48_RS13150	0.63	-2.8
2,881,407	-		HGI48_RS13150	0.63	+0.2
2,881,407	-		HGI48_RS13150	0.63	-1.0
2,881,407	-		HGI48_RS13150	0.63	-0.7
2,881,494	+		HGI48_RS13150	0.74	-0.1
2,881,494	+		HGI48_RS13150	0.74	-1.0
2,881,504	+		HGI48_RS13150	0.75	-0.3
2,881,505	-		HGI48_RS13150	0.75	+0.3
2,881,505	-		HGI48_RS13150	0.75	-2.6
2,881,505	-		HGI48_RS13150	0.75	-1.0
2,881,505	-		HGI48_RS13150	0.75	+0.2
2,881,505	-		HGI48_RS13150	0.75	-1.1
2,881,554	+		HGI48_RS13150	0.81	-0.5
2,881,555	-		HGI48_RS13150	0.82	+1.6
2,881,627	+				-0.8
2,881,627	+				+0.2
2,881,627	+				-0.5
2,881,627	+				-0.4
2,881,628	-				+0.2
2,881,628	-				-0.6
2,881,628	-				-0.3
2,881,628	-				+0.7
2,881,658	+				+0.5
2,881,659	-				+0.6
2,881,694	-				+0.4
2,881,701	+				+0.1
2,881,701	+				-2.1
2,881,702	-				-0.1
2,881,719	-				-0.8